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The map label for this gene is 226947473

Identifier: 226947473

GI number: 226947473

Start: 294916

End: 295200

Strand: Direct

Name: 226947473

Synonym: CLM_0305

Alternate gene names: NA

Gene position: 294916-295200 (Clockwise)

Preceding gene: 226947472

Following gene: 226947474

Centisome position: 7.1

GC content: 32.98

Gene sequence:

>285_bases
ATGAAATTTGATGAATTATATGATATTGCAAAAAATGCATTAAATCCTAGAAAAATTTCTAAAAACTCTTATGCTGGCTC
TGTTGCAGCAGCTATTTTGAGTGAAAGTGGAAAAGTTTATACTGGAGTATGTATAGATACACCTTGTTCTATGGGATTCT
GTGCAGAACATGCAGCTATTGCAGCTATGATTACTGCTGGAGAAAATAGAATAACAAAAGTAGTTGCAGTTTATGAAGAT
GGTACAATCATTCCACCATGTGGAAGATGTAGAGAATTTATTTGA

Upstream 100 bases:

>100_bases
AGATTAGGATTTGGATATGTTGGAATTATTAAAGATGGATTATATGTTGGTAATAAGCGTGAAAAAATAATATAAAAATT
TATTTAAAAGGAGAGTAACT

Downstream 100 bases:

>100_bases
CAAATCCATGATGAAAACTACAAATGTGAAGTAATGATTAAAAAGGATATGATAATTACTATCAATGACTTGTTACCATA
TCGATGGGAATAGACTTAAT

Product: cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein; CMP/DCMP Deaminase

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFI

Sequences:

>Translated_94_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFI
>Mature_94_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFI

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10050; Mature: 10050

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAI
CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH
AAMITAGENRITKVVAVYEDGTIIPPCGRCREFI
HHHEECCCCCEEEEEEEECCCCCCCCCHHHCCCC
>Mature Secondary Structure
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAI
CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH
AAMITAGENRITKVVAVYEDGTIIPPCGRCREFI
HHHEECCCCCEEEEEEEECCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA