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The map label for this gene is 226947460

Identifier: 226947460

GI number: 226947460

Start: 279296

End: 279991

Strand: Direct

Name: 226947460

Synonym: CLM_0289

Alternate gene names: NA

Gene position: 279296-279991 (Clockwise)

Preceding gene: 226947459

Following gene: 226947461

Centisome position: 6.72

GC content: 32.47

Gene sequence:

>696_bases
ATGGATGATAACATATTACGTACCATACCGAGTTTATATCTTGCTAATTATTTAAATGATTTTGAGGATCTTTTAGCTAA
GTACAATATAGTAAAGAAGGCTTATAAGAAGGGTGAAGTTTTAACTCAATATGGAGCAATCAGTGAAACTGCATATTATG
TGAAAAATGGAATTATGCATCTTTCTATCGGGCATGAAGAAGGAGAGAAGTCTATATGCCTTTTTGGTCAAGGAACAATT
TTCCCGATTGATGTGGAACCACGCAAGTTCAAGATGGATTATGAAATGATTATAAGGGCATTTTCAGACTTAGAAGTATA
TAGCATGTCTTATCAAACATTAAAGAAAGTTGCAGAGGAAAATGGAAGATTTACAGGAGAATTGCTTAGGGAAAATTGTG
ACTTTGTTGGCTATATGTTTTTAGATTCAGTTAATCAAACATTCGAACCATGTTTAAGCAGAATTTGTGACATTTTATAT
TTATATTTAATAAATGTTCAGCCCAATGAAGATAAAATTCCGCTGACTCAGTCAGAGTTAGCAAATCTTGCAAGTGCTTC
TAGAGCACAGATGGAAAGGTCATTAAAAATACTTCGAAAAGAACAGACTATCGAGACAGCAAGGGGATATATAAAAGTTT
TAAACCGCAAAAAACTATTTACATATTGTACACAAGGGGTACATGAAAATATTTAA

Upstream 100 bases:

>100_bases
TTTGTTGGGAGCAAGCGCACATACATTAGATATTTTGAGAAAGGAATAATGATAGAAGGAATAGTATTGATATAGTTAAA
AGGGTAGGGGGATGGGTAAC

Downstream 100 bases:

>100_bases
AAATGAAAATATAGTTAGAAAACTGAGTATATGCGAAAGTATATGCTCTTTTATTGTAATAAGCTGCTTTTTCTAATCCA
TCATATGATGGAGAAGAAGA

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDDNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQYGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI
FPIDVEPRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY
LYLINVQPNEDKIPLTQSELANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI

Sequences:

>Translated_231_residues
MDDNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQYGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI
FPIDVEPRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY
LYLINVQPNEDKIPLTQSELANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI
>Mature_231_residues
MDDNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQYGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI
FPIDVEPRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY
LYLINVQPNEDKIPLTQSELANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26700; Mature: 26700

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQYGAISETAYYVKNGIMH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCEEE
LSIGHEEGEKSICLFGQGTIFPIDVEPRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEE
EEECCCCCCCCEEEEECCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILYLYLINVQPNEDKIPLTQSEL
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQYGAISETAYYVKNGIMH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCEEE
LSIGHEEGEKSICLFGQGTIFPIDVEPRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEE
EEECCCCCCCCEEEEECCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILYLYLINVQPNEDKIPLTQSEL
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA