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The map label for this gene is yoaR [H]

Identifier: 226947435

GI number: 226947435

Start: 247784

End: 248944

Strand: Direct

Name: yoaR [H]

Synonym: CLM_0264

Alternate gene names: 226947435

Gene position: 247784-248944 (Clockwise)

Preceding gene: 226947431

Following gene: 226947436

Centisome position: 5.96

GC content: 27.82

Gene sequence:

>1161_bases
ATGGAATTTAGAGAGGTGATATATTTGGTTAAGTCAAGAAAAGATAGAAGAAAGAAAAGATTAAAACCAATGAAAATAGC
ATTAATTACCTTATCAGTTGCAATATTGCTAATGTTATCCGCTTTTGTAACATATCAATATAATAATATAAAATTTTATA
ATAATTTAATTTATCCAGGGGTTTCTGTAGAAGGTGTAGATTTATCTGGTAAAACTAAAGAGGAAGCGAAAAAGATTGTA
CAAGAAAAGTATTGGAATAAATTACTGGATAAGAATATTAATGTAAAAGTTAAAGATAAGACTTATACATTAAAGTATTC
TGATTTAAAACCTACAAGTAATTTAGACAAGGTATTAAAAGATGCAGAAGCTTATGGGAAAAATCTAATAATTTTTAAAA
GATATAGTTTGATAAAAAATAAAACTCCTAAAAATTATTCTATAAATTTTAAATATGATAAGAAGGTAATAGAATCATTA
ATGAGCAAAATAGAAAAGGATGTGAATGTAAGTCCTATAGATGCATCTTTAGCTTCAAATAGAGGTGGCTTTAGTGTTAT
AGCTCATAAAAACGGAGAAAAACTAGATAAAGATAAATTAAAGAAAGATTTGATTCTTAAAATAAATAATGATATATCTA
GTGATATAACAGAAAAGGCTGTAATGAAAACAGTGACGCCTAGAATTACAGAAGACAAGTTACAGGGGGTAGGTAGAATG
ATAGGATCTTATTCAAGTCATTATGGATCTATATCCTCATCTCAAAGGGCAAATAATATAGTTACATCTACAAGTGCTAT
AAATGGTAAAATATTAATGCCAGGAGATGTGTTTAGTTTTAATGGTATTGTAGGTGAAAGAACAGCAGAAAAAGGGTATC
AAGCAGCACCAATTATAGTAGGTGAAAAAATGGAAAATGGATTAGGTGGAGGAGTATGTCAAGTTTCTTCAACTTTATTC
AATGCTGTAGCAGGCTCTAAATTAGAATCCATAGAAAGATCTCATCATACTAAACCAGTGCATTATGTACCACAAGGTAT
GGATGCTACTGTAGATTATGGAAATATAGATTATAAATTTAGAAATAATTTACAAAGTCCTATTTATATAGAGGCTTATA
CAAGCAATGGTAATGTAGTATTTAATCTTTATTCAAAATAA

Upstream 100 bases:

>100_bases
ATTACTTCCAAGTATATACTAAAATTTAGTATTTTAAAATATTCATTAGAAAGAACTTATTAATTTATAGGAAATTTATG
TCTTTTGTAGTATAATATTT

Downstream 100 bases:

>100_bases
CAGTACTTATAAATTAATTAATAACAAAATTAAGTTTTTAGAACAAGCCCTCTTAAAATAGATTTAGTTTTATTTTGAGA
GGGTTTATTTTATACAAATT

Product: vanW-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MEFREVIYLVKSRKDRRKKRLKPMKIALITLSVAILLMLSAFVTYQYNNIKFYNNLIYPGVSVEGVDLSGKTKEEAKKIV
QEKYWNKLLDKNINVKVKDKTYTLKYSDLKPTSNLDKVLKDAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESL
MSKIEKDVNVSPIDASLASNRGGFSVIAHKNGEKLDKDKLKKDLILKINNDISSDITEKAVMKTVTPRITEDKLQGVGRM
IGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGIVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLF
NAVAGSKLESIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK

Sequences:

>Translated_386_residues
MEFREVIYLVKSRKDRRKKRLKPMKIALITLSVAILLMLSAFVTYQYNNIKFYNNLIYPGVSVEGVDLSGKTKEEAKKIV
QEKYWNKLLDKNINVKVKDKTYTLKYSDLKPTSNLDKVLKDAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESL
MSKIEKDVNVSPIDASLASNRGGFSVIAHKNGEKLDKDKLKKDLILKINNDISSDITEKAVMKTVTPRITEDKLQGVGRM
IGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGIVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLF
NAVAGSKLESIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK
>Mature_386_residues
MEFREVIYLVKSRKDRRKKRLKPMKIALITLSVAILLMLSAFVTYQYNNIKFYNNLIYPGVSVEGVDLSGKTKEEAKKIV
QEKYWNKLLDKNINVKVKDKTYTLKYSDLKPTSNLDKVLKDAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESL
MSKIEKDVNVSPIDASLASNRGGFSVIAHKNGEKLDKDKLKKDLILKINNDISSDITEKAVMKTVTPRITEDKLQGVGRM
IGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGIVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLF
NAVAGSKLESIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 43307; Mature: 43307

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFREVIYLVKSRKDRRKKRLKPMKIALITLSVAILLMLSAFVTYQYNNIKFYNNLIYPG
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCEECCC
VSVEGVDLSGKTKEEAKKIVQEKYWNKLLDKNINVKVKDKTYTLKYSDLKPTSNLDKVLK
CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHH
DAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESLMSKIEKDVNVSPIDASLASN
HHHHHCCEEEEEEEHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHCC
RGGFSVIAHKNGEKLDKDKLKKDLILKINNDISSDITEKAVMKTVTPRITEDKLQGVGRM
CCCEEEEEECCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGIVGERTAEKGYQAAPIIV
HHHHHHHCCCCCCCHHCCCEEEECCCCCCEEEECCCEEECCCCCCCCHHHCCCCCCCEEE
GEKMENGLGGGVCQVSSTLFNAVAGSKLESIERSHHTKPVHYVPQGMDATVDYGNIDYKF
CCHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCCHH
RNNLQSPIYIEAYTSNGNVVFNLYSK
HCCCCCCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MEFREVIYLVKSRKDRRKKRLKPMKIALITLSVAILLMLSAFVTYQYNNIKFYNNLIYPG
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCEECCC
VSVEGVDLSGKTKEEAKKIVQEKYWNKLLDKNINVKVKDKTYTLKYSDLKPTSNLDKVLK
CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHH
DAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESLMSKIEKDVNVSPIDASLASN
HHHHHCCEEEEEEEHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHCC
RGGFSVIAHKNGEKLDKDKLKKDLILKINNDISSDITEKAVMKTVTPRITEDKLQGVGRM
CCCEEEEEECCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGIVGERTAEKGYQAAPIIV
HHHHHHHCCCCCCCHHCCCEEEECCCCCCEEEECCCEEECCCCCCCCHHHCCCCCCCEEE
GEKMENGLGGGVCQVSSTLFNAVAGSKLESIERSHHTKPVHYVPQGMDATVDYGNIDYKF
CCHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCCHH
RNNLQSPIYIEAYTSNGNVVFNLYSK
HCCCCCCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]