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The map label for this gene is ylqH [H]

Identifier: 226947401

GI number: 226947401

Start: 212447

End: 212707

Strand: Direct

Name: ylqH [H]

Synonym: CLM_0228

Alternate gene names: 226947401

Gene position: 212447-212707 (Clockwise)

Preceding gene: 226947400

Following gene: 226947402

Centisome position: 5.11

GC content: 33.72

Gene sequence:

>261_bases
TTGAATGAAAGAAAAAAGGCTGCAGCTTTAAAATATGAGGAAAGTTACACATCCCCAGTGGTTACTGCTGCTGGCATGGG
ATATGTAGCAGATAAAATTTTAGAAAAGGCTTCAGAAGAGAAAGTACCTATAGTTTATGACAAGGAATTAGCGAATCTTT
TAACTAATATAGATATAGGCGATTCTATACCCTATGAATTATATGATGCGGTAGCAAAAGTAATAGCATATGTTATGGAG
ATAGACGAGAGAATAAAATAA

Upstream 100 bases:

>100_bases
AAGCAGAAATATTTAATATATCAAACTGTAGAGAATTTTTTAATGATAACAATTTAAATGCTATTGATATTAAAGCATAA
TAAAAGATTGGGTGGTTATT

Downstream 100 bases:

>100_bases
TAGAGGTGATATAGTGAGCTTATATGCAATATCAGATTTACATTTAGCTTTTAATGAAGATAAGCCTATGGATATATTTG
GGGATAAATGGTTTATGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKVPIVYDKELANLLTNIDIGDSIPYELYDAVAKVIAYVME
IDERIK

Sequences:

>Translated_86_residues
MNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKVPIVYDKELANLLTNIDIGDSIPYELYDAVAKVIAYVME
IDERIK
>Mature_86_residues
MNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKVPIVYDKELANLLTNIDIGDSIPYELYDAVAKVIAYVME
IDERIK

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 9617; Mature: 9617

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKVPIVYDKELANLLTNIDIG
CCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCC
DSIPYELYDAVAKVIAYVMEIDERIK
CCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKVPIVYDKELANLLTNIDIG
CCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCC
DSIPYELYDAVAKVIAYVMEIDERIK
CCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]