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The map label for this gene is ypeB [H]

Identifier: 226947351

GI number: 226947351

Start: 159803

End: 161173

Strand: Direct

Name: ypeB [H]

Synonym: CLM_0171

Alternate gene names: 226947351

Gene position: 159803-161173 (Clockwise)

Preceding gene: 226947349

Following gene: 226947352

Centisome position: 3.85

GC content: 26.33

Gene sequence:

>1371_bases
ATGAAAAAAAGTACTAGAAGGATAGCATATACTTTAATTGTGACATTGATAGTTGTTTTTTCAAGTACCTTTGCTATTTT
AATGACCTTAGAAAGAAATGATTATAGAAATTATCTTCAAGGTGAATATAGTAAAAGTCTACATGAATTAATAACTTCTG
TACAAAATATAAGGGTTAATTTATCTAAAGCATCTATTATAGGTTCAAGGGAACAGGAAATAGTTACATTTCAAGAAATA
TTTAAATATTCATCCATGGCTAATGATAAGTTACATGCATTACCTATAGATCAAAATACAATATCAAATACAAGCAAATT
TTTATCCCAAGTAGGAGATTTTTCTAATAGTTTAGGAAAATCAATAGTTAAAGATAATGATTTGTCAAAAAACGATTATG
AAAATATAGAAAGATTAAAAAAGGAATCTCTTCAATTAGAAAATCAACTAAATGCTGTTGTTATGGATGTTAATGAAGGT
AGGGTTAAATGGGGAGATATAAGAAGGAAAGTTAGTGGAGTATTAGCTAAAGAGAATCCAAATTCAGTTAAAGGCCAATT
TGATAACATGAAAAAACAGGTTATGCAGTATCCGGCCTTAATTTACGATGGACCTTTTTCAGATAATATTTTAAAAATAA
CCCCTAAAGTAAATAGTGAAAAAAATATTTCTGAAAGTCAGGCCAAAAAAATAGCACAAAATATAATTGGTAAGGATAAA
ATTAAATCTATTAAATTAGATACAAATGAAGGAAAAACTAATATAGAAACCTATAGATTTATAGCAGATATTAAAGGTAG
GGACAATAAAAACGGTAATGTTACATGTGAAATTAGTAAGCATGGTGGCAAACTAGTATATTTAATAGATTCTAGAAGTA
TAGGCCAACCTAAAATAGATACTAAAAAAGCAAAAAATATAGGAAACGATTATTTGAAAAAGCTTAAAATTTCTAATATG
ATACCTACATATACTTTACATTATGATAATGTGGCTGTAATAAATTATGTATATAAGCAGGATGATGTAATAGTGTACCC
GGATCAAATAAAATTGAAAATAGCTTTAGATAACGGAGAAATAGTAGGAGTAGAATCAGAAAAATATTTAATATCTCATC
ATGATAGGAATATCAATAAAAATATAAAGGTTAGTCAAAAGGAAGCACAAAAGAGAGTTGGGAAAAATTTAAATATTACT
AATGTTAGATTAAGCATTATTCCAACAGAGACTAATACAGAAGTTTTGTGCTATGAATTTTCTGGAACTTATAAAAATGA
TAAATTTAAGATATTTATAAATGCTAATACAGGATATGAAGAGAGAATATTACAAATACTAGATACTCCAAATGGTGAAT
TAACAATATAA

Upstream 100 bases:

>100_bases
TAAATTATAGTTATATATTTAAATAAATTTTGTTAATTAATGAATAACCTAAACTATAAATACAGATAATAAGGTAAGAA
ATGTTGGGAGGTTATGATAT

Downstream 100 bases:

>100_bases
TATAATTTAAAATAAAGAGTGAATAATAGTGTATTCACTCTTTATTTGTATTATAATAATAGTTATTGAAAAGTAAGTAA
TATGAAAAGAAGGGTGAGTT

Product: germination protein YpeB

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKKSTRRIAYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVNLSKASIIGSREQEIVTFQEI
FKYSSMANDKLHALPIDQNTISNTSKFLSQVGDFSNSLGKSIVKDNDLSKNDYENIERLKKESLQLENQLNAVVMDVNEG
RVKWGDIRRKVSGVLAKENPNSVKGQFDNMKKQVMQYPALIYDGPFSDNILKITPKVNSEKNISESQAKKIAQNIIGKDK
IKSIKLDTNEGKTNIETYRFIADIKGRDNKNGNVTCEISKHGGKLVYLIDSRSIGQPKIDTKKAKNIGNDYLKKLKISNM
IPTYTLHYDNVAVINYVYKQDDVIVYPDQIKLKIALDNGEIVGVESEKYLISHHDRNINKNIKVSQKEAQKRVGKNLNIT
NVRLSIIPTETNTEVLCYEFSGTYKNDKFKIFINANTGYEERILQILDTPNGELTI

Sequences:

>Translated_456_residues
MKKSTRRIAYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVNLSKASIIGSREQEIVTFQEI
FKYSSMANDKLHALPIDQNTISNTSKFLSQVGDFSNSLGKSIVKDNDLSKNDYENIERLKKESLQLENQLNAVVMDVNEG
RVKWGDIRRKVSGVLAKENPNSVKGQFDNMKKQVMQYPALIYDGPFSDNILKITPKVNSEKNISESQAKKIAQNIIGKDK
IKSIKLDTNEGKTNIETYRFIADIKGRDNKNGNVTCEISKHGGKLVYLIDSRSIGQPKIDTKKAKNIGNDYLKKLKISNM
IPTYTLHYDNVAVINYVYKQDDVIVYPDQIKLKIALDNGEIVGVESEKYLISHHDRNINKNIKVSQKEAQKRVGKNLNIT
NVRLSIIPTETNTEVLCYEFSGTYKNDKFKIFINANTGYEERILQILDTPNGELTI
>Mature_456_residues
MKKSTRRIAYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVNLSKASIIGSREQEIVTFQEI
FKYSSMANDKLHALPIDQNTISNTSKFLSQVGDFSNSLGKSIVKDNDLSKNDYENIERLKKESLQLENQLNAVVMDVNEG
RVKWGDIRRKVSGVLAKENPNSVKGQFDNMKKQVMQYPALIYDGPFSDNILKITPKVNSEKNISESQAKKIAQNIIGKDK
IKSIKLDTNEGKTNIETYRFIADIKGRDNKNGNVTCEISKHGGKLVYLIDSRSIGQPKIDTKKAKNIGNDYLKKLKISNM
IPTYTLHYDNVAVINYVYKQDDVIVYPDQIKLKIALDNGEIVGVESEKYLISHHDRNINKNIKVSQKEAQKRVGKNLNIT
NVRLSIIPTETNTEVLCYEFSGTYKNDKFKIFINANTGYEERILQILDTPNGELTI

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51897; Mature: 51897

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSTRRIAYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVN
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHEEEE
LSKASIIGSREQEIVTFQEIFKYSSMANDKLHALPIDQNTISNTSKFLSQVGDFSNSLGK
EEHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SIVKDNDLSKNDYENIERLKKESLQLENQLNAVVMDVNEGRVKWGDIRRKVSGVLAKENP
HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHEECCCC
NSVKGQFDNMKKQVMQYPALIYDGPFSDNILKITPKVNSEKNISESQAKKIAQNIIGKDK
CCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
IKSIKLDTNEGKTNIETYRFIADIKGRDNKNGNVTCEISKHGGKLVYLIDSRSIGQPKID
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC
TKKAKNIGNDYLKKLKISNMIPTYTLHYDNVAVINYVYKQDDVIVYPDQIKLKIALDNGE
HHHHHCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCEEEECCCEEEEEEECCCC
IVGVESEKYLISHHDRNINKNIKVSQKEAQKRVGKNLNITNVRLSIIPTETNTEVLCYEF
EEEECCCCEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEE
SGTYKNDKFKIFINANTGYEERILQILDTPNGELTI
CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEC
>Mature Secondary Structure
MKKSTRRIAYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVN
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHEEEE
LSKASIIGSREQEIVTFQEIFKYSSMANDKLHALPIDQNTISNTSKFLSQVGDFSNSLGK
EEHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SIVKDNDLSKNDYENIERLKKESLQLENQLNAVVMDVNEGRVKWGDIRRKVSGVLAKENP
HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHEECCCC
NSVKGQFDNMKKQVMQYPALIYDGPFSDNILKITPKVNSEKNISESQAKKIAQNIIGKDK
CCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
IKSIKLDTNEGKTNIETYRFIADIKGRDNKNGNVTCEISKHGGKLVYLIDSRSIGQPKID
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC
TKKAKNIGNDYLKKLKISNMIPTYTLHYDNVAVINYVYKQDDVIVYPDQIKLKIALDNGE
HHHHHCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCEEEECCCEEEEEEECCCC
IVGVESEKYLISHHDRNINKNIKVSQKEAQKRVGKNLNITNVRLSIIPTETNTEVLCYEF
EEEECCCCEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEE
SGTYKNDKFKIFINANTGYEERILQILDTPNGELTI
CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]