Definition | Laribacter hongkongensis HLHK9, complete genome. |
---|---|
Accession | NC_012559 |
Length | 3,169,329 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 226939024
GI number:
Start: 87275
End: 89128
Strand: Reverse
Name: Not Available
Synonym: LHK_00090
Alternate gene names: NA
Gene position: NA
Preceding gene: 226939026
Following gene: 226939022
Centisome position: NA
GC content: NA
Gene sequence:
>1854_bases ATGGCGACGAATGTATTTTATGAAGAAAGCGGCAGCTTCAAGGTAGGGGCGATCATGAGCGAGACTGATGCCAGTCTTCA AGTCGAGGCCCCGCACGGCAAGCGCTCCAAGATCAAATCGGCCACGGTGCTGCTGCGCTTTAATTCGGCGCTGGCCGACT TCATGCCGGCGGTCGAAGCGCTGGCAGCCGACCTTGACCTCGACTTCCTGTGGGAGTGCTGCGGCGAGGACGAATTCGAC GCCGCCGGCCTGGCGGCCGACTACTTCGGCCAGACGCCGTCGGCCATCGAAACCGCTGCCATCAGCCTGCGCCTGCACGA AGCGCCGATGTACTTCTACAAGAAGGGCCGGGGCCGTTACAAGGCCGCGCCGGAAGAATCGCTGAAAGCGGCGCTGGCCG GACAGGAAAAAAAGCGCCTGCAACAGTTGCAGATCGATGCCTGGGTGGAAGAATGCCGCGCCGGCCGGCTGCCGGAAGCG TGGCGCCCGCACCTGATGTCGCTCCTGTGGAAACCGGACAAGAACACGCTGGAATGGAAAGGGCTGGAAGCTGCCTGCAA GGCGCTGGCGCTGTCGCCGCTCAAGCTGGTGGCCGAACGCGGCGGCATCGGTTCGGTACCGGACTACCTGCTGGCCGGCT TCATCATGGAACACTTCCCGCGCGGACGCGGCTTCCCGGCGCTCGACCTGCCGGTGGCACCGGCCGAGCTGCCGGCGGCC AGCGTCGAGGCCTTCTCGATCGACGACTCGGCCACCACCGAGATCGACGATGCACTGTCGCTGACCCGGCTCGCCAACGG CAACTGGCAGGTGGGCGTGCACATTGCCGCGCCGACGCTGGACGCGCCGCGTGACGGCGGGCTGGAGCAGCTGGTGTTCC AGCGCCTTTCCACCGTGTATTTCCCCGGCGACAAGATCACCATGCTGCCCGACGAGGTGGTGGGGGTGTTTTCGCTCAAC GAGGGGCAGTACTGCCCGGCGGTGAGCGTGTATTTCGAGGTGACGCCGGAATTCGAGATCATCAGCCACGAAAGCCGGGT CGAGCGGGTCAACATTGCCGCCAACCTGCGCCACGACTGGCTGGAAACCGTGTTCAACGAAGAAACGCTGGCCAGCGACA CCGGCCGCGATTATCCGTACAAGGCCGAGCTGACCACCCTGTGGCAGTTTGCCAATGCGCTGGAAGTGCGCCGCGGCAAG GCCGATACCAATGCCACCGTGCGGCTGGACTACAACTTTGCCATCGTCGACGGCAAGGTCGTGCTGACCACCCGGCGGCG CGGGGCGCCGATGGACAAGCTGGTGAGCGAGCTGATGATCCTCGCCAACTCGACCTGGGGCGGTGACCTGGCCGCCGCCG GCATTCCGGCCATGTACCGCGCCCAGACCGCCGGCAAGGTGCGCATGACCACCGCCGCCGAACCGCACGTCGGCCTTGGC GTGGCGCAGTATGCTTGGGCTACCTCGCCGCTGCGCCGGGCCGCCGACTTCGTGAACCAGCAGCAGATCGTGGCGATGAT CCGGGGCGAAACGCCGCGCTACAAGCGCGGGGACGCCGACCTCTTTGCCCGTCTGCGCGACTTCGACCAGGCCTACAACG CCTATGCCGACTTCCAGTACCAGATGGAACGCTTCTGGTGCCTGCGCTGGTTTACCCAGGAAAACGTCAGCGACGTGACC GCGCTGTGGGTCAAGGACGACCTGGTGCGCATCGACGGCCTGCCGCTGGCAGTACGCGTGGCCGGCCTGCCGGAGATGCA GCCCGGCGAGCGGGTGCGCCTGCAGGTGGCGCGCATCGACGAACTGGCGCTGGAAATCGAGTTCCGCGTGCTGGGCAAGG CCGAAACGGCCTAA
Upstream 100 bases:
>100_bases TGCTGTCGCGGTCGATGGCCGTTAGGGCTTCCACAATCTCGGGCATGGCGGCCTCCGGGGTATAATCGCCGCCTTTTCGA GTTCCGGCAGGCCCCGAATC
Downstream 100 bases:
>100_bases CGGCGGCGCCGGGCCGGCAGCGACTGCTGCTGGCTGTCGCTGCCGCGATAGCGCTGCCAGAGCTTCCATCCGACCAGGGC CATGACGGCCAGCAGCAGGG
Product: ribonuclease II
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>617_residues MATNVFYEESGSFKVGAIMSETDASLQVEAPHGKRSKIKSATVLLRFNSALADFMPAVEALAADLDLDFLWECCGEDEFD AAGLAADYFGQTPSAIETAAISLRLHEAPMYFYKKGRGRYKAAPEESLKAALAGQEKKRLQQLQIDAWVEECRAGRLPEA WRPHLMSLLWKPDKNTLEWKGLEAACKALALSPLKLVAERGGIGSVPDYLLAGFIMEHFPRGRGFPALDLPVAPAELPAA SVEAFSIDDSATTEIDDALSLTRLANGNWQVGVHIAAPTLDAPRDGGLEQLVFQRLSTVYFPGDKITMLPDEVVGVFSLN EGQYCPAVSVYFEVTPEFEIISHESRVERVNIAANLRHDWLETVFNEETLASDTGRDYPYKAELTTLWQFANALEVRRGK ADTNATVRLDYNFAIVDGKVVLTTRRRGAPMDKLVSELMILANSTWGGDLAAAGIPAMYRAQTAGKVRMTTAAEPHVGLG VAQYAWATSPLRRAADFVNQQQIVAMIRGETPRYKRGDADLFARLRDFDQAYNAYADFQYQMERFWCLRWFTQENVSDVT ALWVKDDLVRIDGLPLAVRVAGLPEMQPGERVRLQVARIDELALEIEFRVLGKAETA
Sequences:
NA
Specific function: NA
COG id: COG0557
COG function: function code K; Exoribonuclease R
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA