Definition | Rhodococcus opacus B4, complete genome. |
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Accession | NC_012522 |
Length | 7,913,450 |
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The map label for this gene is nasD
Identifier: 226360014
GI number:
Start: 619449
End: 621614
Strand: Direct
Name: nasD
Synonym: ROP_06000
Alternate gene names: NA
Gene position: NA
Preceding gene: 226360013
Following gene: 226360015
Centisome position: NA
GC content: NA
Gene sequence:
>2166_bases GTGCTGATCGTCGCCACGGGAAGCAACACGTTCTTTCCCAACATGGACGGACTGCGGGAGCACGACGGTCGCCTGGCCCG CGGGGTGTTCGGATTCCGCAACATCGCCGACACCAACGGGATGCTGCAGATGGCACAGGCACACGACGACGTGTCCGCGG TGGTGATCGGCGGCGGACTGCTCGGGCTCGAGGCCGCGTACGGGCTGCGGACGCAGGGGCTCACCGTCGACGTCGTGCAC TCCCCCGGGCATCTGATGAACCAGCAACTCGACGAACGCGGCGGCAGCGTCCTGCGCGCCGAGATCGAGAAACTCGGTGT CGGCGTTCACACCTCGATGCGGACCACCGCCGTGCTGCGCGACGACGCCGGCCTGGTGACCGGGGTGTCGTTCGTCGACG GCTCCACGCTGGACGCCGACATGGTGGTCGTCACCGCGGGAATCCGGCCCAACACCGAACTGGCGCGGGCCGCAGGTCTG GTGGTCGAGCGCGGGATCGTCGTCGACGACCAGATGCGCTGCGAGGACGAGGGTTCGGTGTACGCCGTCGGCGAGTGCGC GCAGCACCGGGGAGAGACGTACGGCCTCGTGGCCCCGGTGTGGGAGCAGGCGGTCATCCTCGCGGACGTCCTCACCGGCT CCGATCCGGAAGCGGCCTATGTCGGTTCGCGCACCACCACCCAGCTGAAGGTCGCGGGGGTGGACGTGGCCGCGATGGGC GTCAAGGGGCCGGAGACCGCGGACGACGAATTCGTCCAATACTACGAACCACGCAGCGGCACGTACAAGAGTCTCGTCGT CCGGGACGGAAAGCTGATCGGCGCCACCCTGATGGGCGACATCAGCAAGGCGGGCTTCCTCACGCAAGCGTTCGACGGCA AGGTGCCGCTGCCCGAGGAGCGAATCAGCATGCTCTTCGACGTCGGCACACCCGCCGCCGCGACGAGTGTCGCCGACCTT CCCGACGACCTGCAGGTGTGCAACTGCAACGGTGTGAGCAAGGGCGATCTGGTGGCCTGCGTCCACTCCGGCGCGAAGAC CCTCACCGACGTGTGCGCCACGACCCGCGCGGGCAAGGGTTGTGGGTCGTGCAAGGGACTCGTCGCCGACATCGTGGCCT GCGCCGCCGGCGGCGAACTCGAAGCGGACCCCTCCGCCGACTGGTACGTGCCGTGCATCCCGATGAGCAAGCCCGAGCTC ACCGCGGCCATCCGGGAACGCGATCTGCGCGCCGTGTCCCAGGTGTTCGCCGAACTCGCGACGGACGCCAACGAGGACGC GTCCGCGAAGATGCCGCTCGCGTCACTGCTCCGCACGATCTGGGGGCCCGACTGGGTGGACGAGCGCGGCGCGCTGTTCA TCAACGACCGCGTGCACGCCAACATCCAGCGCGACGGCACGTTCTCGGTGGTCCCGCAGATGAAGGGCGGTGTCACCACG CCGGACCAGCTCCGCAGGATCGCCGACGTCGCCGACAAGTACCGCGTGCCGCTCGTGAAGGTCACCGGTGGGCAGCGCAT CGACCTGCTGGGCATCAAGAAGGAGGATCTCCCCAAGGTGTGGGGCGACCTCGACATGCCGTCCGGGTTCGCCTACGGCA AGAGCATGCGCACGGTGAAAACCTGTGTCGGAACGGACTTCTGCCGCTACGGTCTCGGCGATTCGACGAGCCTCGGCATC GCTCTCGAGGAGCGGTTCCAGGGTCTGGAGACGCCCGCGAAGCTGAAACTCGCGGTCGCCGGGTGCCCCCGCAACTGTTC CGAGGCCCTGTGCAAGGACTTCGGGGTGGTCGCGGTCGGCGACGGCCGCTGGGAGATCTACGTCGGCGGCGCCGCGGGCG CCCATATCCGCAAGGGCGATCTGCTGGCCACGGTCGAATCACCGGACGCCGTCGTGGAACTCGGCGGGCGGTTCATCCAG TACTACCGCGAGAACGCGAAATGGCTCGAACGCACCTACGATTTCGTGCCGCGGGTGGGACTCGAACATCTTCAGGCACT ACTGGTCCGGGACGAGGAGGACATCGTGACGGGATTGGACGAGCGGATCCAGACGGCGGTGGACGGCTACCGGGATCCGT GGAAGGAGCGCAGCGCGCCGAAATCGCCGGCGCAGTTCGCTCCCTCGCTCCCGCTGCTGCCGCTCCCCCAGGTGCCGGTC CGATGA
Upstream 100 bases:
>100_bases TGGTACACGGCGAACGGTGTGAAACTCCACGCCGGGGACCGCGCTCGACAGGTTCGCGAAGACCGTCACGTGCGAGAGCG GCCGCGTCGTCGACTACGAC
Downstream 100 bases:
>100_bases CCGCCCTCATCGAGGGTCCCACCGAGTTCGCGGTGGGGCCGGTCAGCGACCTGACTCCGGGCGAGGGCCGGACGTACGTC GTGCAGGACCGGCAGGTGGC
Product: nitrite reductase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>721_residues MLIVATGSNTFFPNMDGLREHDGRLARGVFGFRNIADTNGMLQMAQAHDDVSAVVIGGGLLGLEAAYGLRTQGLTVDVVH SPGHLMNQQLDERGGSVLRAEIEKLGVGVHTSMRTTAVLRDDAGLVTGVSFVDGSTLDADMVVVTAGIRPNTELARAAGL VVERGIVVDDQMRCEDEGSVYAVGECAQHRGETYGLVAPVWEQAVILADVLTGSDPEAAYVGSRTTTQLKVAGVDVAAMG VKGPETADDEFVQYYEPRSGTYKSLVVRDGKLIGATLMGDISKAGFLTQAFDGKVPLPEERISMLFDVGTPAAATSVADL PDDLQVCNCNGVSKGDLVACVHSGAKTLTDVCATTRAGKGCGSCKGLVADIVACAAGGELEADPSADWYVPCIPMSKPEL TAAIRERDLRAVSQVFAELATDANEDASAKMPLASLLRTIWGPDWVDERGALFINDRVHANIQRDGTFSVVPQMKGGVTT PDQLRRIADVADKYRVPLVKVTGGQRIDLLGIKKEDLPKVWGDLDMPSGFAYGKSMRTVKTCVGTDFCRYGLGDSTSLGI ALEERFQGLETPAKLKLAVAGCPRNCSEALCKDFGVVAVGDGRWEIYVGGAAGAHIRKGDLLATVESPDAVVELGGRFIQ YYRENAKWLERTYDFVPRVGLEHLQALLVRDEEDIVTGLDERIQTAVDGYRDPWKERSAPKSPAQFAPSLPLLPLPQVPV R
Sequences:
NA
Specific function: NA
COG id: COG1251
COG function: function code C; NAD(P)H-nitrite reductase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA