The gene/protein map for NC_012490 is currently unavailable.
Definition Rhodococcus erythropolis PR4, complete genome.
Accession NC_012490
Length 6,516,310

Click here to switch to the map view.

The map label for this gene is dapE

Identifier: 226307658

GI number:

Start: 4585178

End: 4586254

Strand: Reverse

Name: dapE

Synonym: RER_41710

Alternate gene names: NA

Gene position: NA

Preceding gene: 226307661

Following gene: 226307657

Centisome position: NA

GC content: NA

Gene sequence:

>1077_bases
GTGCGTGTGAGCATCCTCGATCTTGCTTCGGACCCCATCGACTTGACGGCCGCCCTGGTCGACATCCCCAGCGTCTCGCA
CGACGAATCCGTCATCGCGCAGGCCGTCGAGGATGCGCTGCGTGAGCAGACTTCGGGCTTCGAGATCATCCGCAACGGCA
ATGCCGTGTTGGCGCGTACGTCGCGTGGTTTGCCCAGTCGCGTCATGCTCGCCGGACATCTGGATACGGTGCCCATCGCG
GACAACGTTCCTTCGCGGCGTGACGGCGACATCCTGCACGGCTGCGGGACCGTCGACATGAAGTCGGGCGATGCGGTCTT
TCTGCACCTGGCGGCCACCATCGAGAACCTGGCCCACGATCTGACCCTGGTTTTCTACGACTGCGAAGAGATCGCCGCAA
CCTTCAACGGCCTGGGACGGATCGAACGCGAGATCCCGGAATGGCTCGCGGCCGACGTCGCAATTCTCGGTGAGCCGACG
GCCGGTTTCATCGAGGCCGGGTGCCAGGGCACGATGCGGGTTCGGTTGACGGCTTCGGGAACTCGCGCACATTCGGCCAG
GTCCTGGCTGGGGGACAACGCCATTCACAAGTTCGGCGGTGCGTTGGAGCGGTTGTCGAGTTACCGGCCGCGCTCGGTCG
ACATCGACGGTTGCGGCTACCGCGAAGGTTTGTCGGCGGTGCGGATTTCTGGCGGTGTCGCCGGAAACGTCGTCCCGGAC
GAAGCCGAGATGGACGTCAACTTCCGATTCGCGCCCGATCGCAGCGAGGCGCAAGCCGAGTCGCACGTGCGCGAAGTGTT
CGACGGCCTGGGCCTCGGATTCGAGGTCACCGACTCCTCGCCCGGCGCGCTGCCTGGCTTGGCGAACCCGTCCGCTGCCG
CCCTGATCGAGGCGGCCGGTGGTCAGTTCCGTGCGAAGTACGGGTGGACCGACGTGTCCAGGTTCTCGGCGCTCGGCATT
CCTGCCGTGAACTACGGACCGGGTGATCCGAACCTCGCACACAAACGCGACGAGCACGTTCCGGTGCAGCAGATCACCGA
CGTCGCGGCCGTGCTGAGGAAGTATCTGTCGGCCTGA

Upstream 100 bases:

>100_bases
GGTTCCGTCCGCGGTCACGTTGGCGATACCTACTGCTGTTGCTCCCTGTGCGCTCACGGGACTAGAGATTACTGGGTGGT
GGGTGCACCGGCCTAGGCTG

Downstream 100 bases:

>100_bases
CCGTTAGCCTTGCCGCATGGCACCAGAGAAGAATTCGGCTTCGAAGAAGCAGAGCTCGTCGATCAAGCACCGCGGGCCCG
TTCAGCTTCGACGCAAGCGC

Product: succinyl-diaminopimelate desuccinylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>358_residues
MRVSILDLASDPIDLTAALVDIPSVSHDESVIAQAVEDALREQTSGFEIIRNGNAVLARTSRGLPSRVMLAGHLDTVPIA
DNVPSRRDGDILHGCGTVDMKSGDAVFLHLAATIENLAHDLTLVFYDCEEIAATFNGLGRIEREIPEWLAADVAILGEPT
AGFIEAGCQGTMRVRLTASGTRAHSARSWLGDNAIHKFGGALERLSSYRPRSVDIDGCGYREGLSAVRISGGVAGNVVPD
EAEMDVNFRFAPDRSEAQAESHVREVFDGLGLGFEVTDSSPGALPGLANPSAAALIEAAGGQFRAKYGWTDVSRFSALGI
PAVNYGPGDPNLAHKRDEHVPVQQITDVAAVLRKYLSA

Sequences:
NA

Specific function: NA

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA