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The map label for this gene is 226225342

Identifier: 226225342

GI number: 226225342

Start: 2847517

End: 2848275

Strand: Reverse

Name: 226225342

Synonym: Lm4b_02765

Alternate gene names: NA

Gene position: 2848275-2847517 (Counterclockwise)

Preceding gene: 226225343

Following gene: 226225341

Centisome position: 97.79

GC content: 36.63

Gene sequence:

>759_bases
GTGATTCACTCAACTCTGAGTGGAATCACGAAACGAATGGCAAAAATCATTTTTGTGAAAGACGAACAAAATGAGTTCCA
AGCGTATGATTTCTTACAAAATTTAATTGTGGAAGAACCACTAATGGCCACTTTAGTATTTCAAGGCCTGTTACAACTAG
AAACAGCAGAAACGAGAAAACTTAGCACTGGTAAGCAAATTCTCCCCGATGTCCATTTAATTATCGGTAAAAGTCAAGCT
TACTCACTACAAACAACTCGAGTGGAAACAACTGTAGACCAACCGATTCAAGAGATGAAAGCACATTTTAAAGATAAAAA
TTGTCGTTTAATTTACTTCACTGCTTTTAGTGGCGATGAAACCTATTATTGCTTCGTTAAAGGCTATTTTAAAGATAAAA
ACCCGTTCACGGATCAAATGAGTGCTTACCGCGAAGAAGTCAAACGCGTATTCTTGCGTCGTATTGAAGCGGAAACAAGC
ATTGGTCATGCAGACTATCAATTCGAAACACTAAAAAATAAAGCTTTAGCAAATGAAGGCATTGCTCATTACTTAGATAG
TTTTTCAGCAAGCCTTGGTAAATATATTTTCTCTAAACGAATGGAGAAGAAATGGTCTCAACTAGATTTAGCGCTTAAAT
CAGATTTATCTCCTGTTATTATTGGGCGTTTAGAAGCAGGGGATCCAGATTTGACTCTTAGAATGTATCAAAAAGTCTGC
ACGGTTCTAGGTGTTAAGACAACATTCTCTGTAGATTGA

Upstream 100 bases:

>100_bases
TTCGAGTGGGTTTGGTTTATTTTGTAAAAAATAGAGAAAATAAGTGCAATTTTGAGCAGAAAAAAGTACAATAGAATTAG
GTAAAGTTGTAAAGGAGGGA

Downstream 100 bases:

>100_bases
AGATAGAAAAGTAATCAGCTTAGGTTGGTTGCTTTTTTATTTTAAAATGTTTCACGTGAAACATTTCTAGGTTTTAAGAA
TATCATTTTCACCATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQLETAETRKLSTGKQILPDVHLIIGKSQA
YSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETS
IGHADYQFETLKNKALANEGIAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVC
TVLGVKTTFSVD

Sequences:

>Translated_252_residues
MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQLETAETRKLSTGKQILPDVHLIIGKSQA
YSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETS
IGHADYQFETLKNKALANEGIAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVC
TVLGVKTTFSVD
>Mature_252_residues
MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQLETAETRKLSTGKQILPDVHLIIGKSQA
YSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETS
IGHADYQFETLKNKALANEGIAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVC
TVLGVKTTFSVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28918; Mature: 28918

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQLETAETRK
CCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDE
HCCCHHHCCCEEEEEECCCCEEEEHEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
TYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETSIGHADYQFETLKNKALANEG
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH
TVLGVKTTFSVD
HHHCCCEEEECC
>Mature Secondary Structure
MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQLETAETRK
CCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDE
HCCCHHHCCCEEEEEECCCCEEEEHEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
TYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETSIGHADYQFETLKNKALANEG
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH
TVLGVKTTFSVD
HHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA