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The map label for this gene is parB

Identifier: 226225340

GI number: 226225340

Start: 2845688

End: 2846539

Strand: Reverse

Name: parB

Synonym: Lm4b_02763

Alternate gene names: 226225340

Gene position: 2846539-2845688 (Counterclockwise)

Preceding gene: 226225341

Following gene: 226225339

Centisome position: 97.73

GC content: 35.09

Gene sequence:

>852_bases
ATGGCTAAAGGTCTAGGTAAAGGAATCAATGCACTATTTAATAATGTAGATACGAATGAAGAAACCGTACAAAATATCGC
TATAAAAGATATTAAGCCAAATCCATATCAACCACGTAAAATCTTTGATACGAAAGCAATCAATGAATTACGTGACTCCA
TTAAAATTCACGGTGTTTTGCAGCCAATAATATTAAGAAATACAGATAAAGGATATGAAATTGTTGTTGGTGAACGTAGA
TTTCGTGCAGCAAAAGAAGCTAAATTAAAAGAAATCCCAGCAGTTGTACGTGATTTAACGGAAGAAGAAATGATGGAGCT
TTCTGTCATTGAAAACTTACAACGCGAAGATTTATCTCCACTTGAAGAAGCGGAATCATATCAGTTCCTTATGAAAAAAT
TGGGCTTAACGCAAGCAAAATTAGCAGAACGCGTTGGGAAAAGTAGACCATATATCGCTAACTTTGTTCGTCTTTTGACA
TTACCTGAAGAAGTTCAAGTAATGTTACGTGATGGCTCATTGTCAGCTGGACATGGCCGAGTGTTACTAGGTTTGAAACT
TAAGAAAAATATTATCCCAACGGCTAAAAAAACTGTGGCGCAAGGGCTGACAGTACGACAATTAGAAGATGTGGTTAATA
ATCTAAATGAAAATGTTTCACGTGAAACAATTAAGCCGGCTAGAGTTCCTATCTTTATCCGTGAAAGCGAAAGCCAATTA
CGTGATAAATTTGGTACGGCTGTCTCGATTAAACGTCGCGATAAAAAAGGTAAAATTGAAATTGAATTTTTATCTGATGA
TGATTTAGATCGCATTTTAGAGATTTTAGATATTCAGTTTGATGATGAATAG

Upstream 100 bases:

>100_bases
CTAAGTGAAGCACCTAGTCATGGAAAACCGATTTTGTTATATGATGCAAAATCAAAAGGTGCTGAAGTTTATTTAGAATT
AGCAAAGGAAGTGGTTGCAC

Downstream 100 bases:

>100_bases
GTTGTGATGTTTATGGAAAAAAAGCATTTCGATTTAAATGATATTGTGGAAATGAAAAAGCCTCATCCTTGTGGTACCAA
TCGATTTAAGATTATACGCA

Product: Partition protein ParB homolg

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERR
FRAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLT
LPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQL
RDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE

Sequences:

>Translated_283_residues
MAKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERR
FRAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLT
LPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQL
RDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE
>Mature_282_residues
AKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERRF
RAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTL
PEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQLR
DKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32170; Mature: 32038

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELRDSIKIHGVL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QPIILRNTDKGYEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSP
HHHHEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
LEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLRDGSLSAGHGR
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCE
VLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQL
EEEEEEHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
RDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE
HHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELRDSIKIHGVL
CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QPIILRNTDKGYEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSP
HHHHEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
LEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLRDGSLSAGHGR
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCE
VLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQL
EEEEEEHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
RDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE
HHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]