Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is ppaX [H]
Identifier: 226225281
GI number: 226225281
Start: 2773437
End: 2774048
Strand: Reverse
Name: ppaX [H]
Synonym: Lm4b_02704
Alternate gene names: 226225281
Gene position: 2774048-2773437 (Counterclockwise)
Preceding gene: 226225282
Following gene: 226225277
Centisome position: 95.24
GC content: 40.2
Gene sequence:
>612_bases ATGTATAAAGCAATAATTTTTGACGTAGATGGAACAATTCTAGACACGGAGAGAGCTGTTTTGCATTCTCTTCAAGCGGT TTTAGCCGAAGAAGGATTAAGTTATGAACTGGACGAATTACGATTTGTCCTTGGAATTACCGGAGCAGCTGCGGTGGAAC AATTAAACATTCTGGATCCAGAGAAAGTATTGGATAAATGGATTGAACGAGAAGCAACTTTCATTGAAGAAGTAGAGGTG TTCGAAGGCATTCATAAAGTACTGCATGCCATTCCAGAAAGCGGTGTTGTCACTTCTAAAAACGCGTTAGAAATGGAAAA AGGTTTCTATCCGTTTAATATTCAGGATCATTTTCAAGCGATTGTTTGCGCAAGTGATACCGAAAACCATAAACCTCACC CAGATCCACTGCTGAAAGGGTTAGAAATTCTTGGAAGAGAGCCACATGAAGTGCTTTATGTTGGTGATTCTTCGTACGAT ATGAAATGTGCCCATGCGGCCGGAGCTCATTTTGGCTTAGCACTTTGGGGCGCGAAGACAACAGATGGCTTTGAAAAAGC AGAACTTGTCTTCGAAAAACCAGAAGATATTTTAGCTTATGTAAGTAAATAA
Upstream 100 bases:
>100_bases ACCAACAGCGCAGAAATCCAAAAAGCGGAAAGTAAGAAAAAAGCAAGATATACAACGCACCATTATCACAACTTCGCTAA ATCTTGAAGGAGGAAATTAT
Downstream 100 bases:
>100_bases GTAAAACCCGCCAACCTTGAATGAAGGCTAGCGGGTTTTTTGTTATAAATTATTGTAATGCTCGTTGGAAACAGGTTCTA ACCAGGTCGTTCCGCCTAAT
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVLGITGAAAVEQLNILDPEKVLDKWIEREATFIEEVEV FEGIHKVLHAIPESGVVTSKNALEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK
Sequences:
>Translated_203_residues MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVLGITGAAAVEQLNILDPEKVLDKWIEREATFIEEVEV FEGIHKVLHAIPESGVVTSKNALEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK >Mature_203_residues MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVLGITGAAAVEQLNILDPEKVLDKWIEREATFIEEVEV FEGIHKVLHAIPESGVVTSKNALEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789046, Length=175, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 22580; Mature: 22580
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVLGITGAAAVEQLNILDP CCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCH EKVLDKWIEREATFIEEVEVFEGIHKVLHAIPESGVVTSKNALEMEKGFYPFNIQDHFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCHHHHHEE IVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYDMKCAHAAGAHFGLALWGAKT EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCC TDGFEKAELVFEKPEDILAYVSK CCCHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVLGITGAAAVEQLNILDP CCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCH EKVLDKWIEREATFIEEVEVFEGIHKVLHAIPESGVVTSKNALEMEKGFYPFNIQDHFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCHHHHHEE IVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYDMKCAHAAGAHFGLALWGAKT EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCC TDGFEKAELVFEKPEDILAYVSK CCCHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]