| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225228
Identifier: 226225228
GI number: 226225228
Start: 2719955
End: 2720767
Strand: Reverse
Name: 226225228
Synonym: Lm4b_02650
Alternate gene names: NA
Gene position: 2720767-2719955 (Counterclockwise)
Preceding gene: 226225229
Following gene: 226225223
Centisome position: 93.41
GC content: 40.84
Gene sequence:
>813_bases ATGCATAAAACAATCCGTAGCGTAGACGTTTATTATGAAAAATATGGTGAAGGAATACCGATAATAATGATTCATGGTTT TGGTCCTGATTCGCAGCTGATGATTGGTTGCATGGAGCCGGTCTTTGATAAGGAAAGTCCATTTTCACGCATTTATGTGG ATTTGCCTGGAATGGGAAAAACCGAGAATTACGATTCAATCCAAAATGCTGACCATGTACTCACCCTTTTACTAGAATTT ATTGAAGCGGTAATTCCGGGAGAGCAATTCGTACTCGCCGGAGAATCGTATGGTGGTTATTTAGCCCGCGGAATCGCAGC GAAAATGCCAGATAGAGTACTTGGAGTCTTACTTATTTGCCCAGTCATCTATCCTGAAAAAGAAAGAAGAACGCTACCCG AACAAAAAGTCATGTACCAAGATGATACGTTTGTACGGTCGCTATCAAAAGAAGACCGAGCGTACTTTTCAAAAAGTGGC GTTATTTTAACAGCAAGAAACTGGAATCGTTTCTTGGCGGAAGTGATGGCGGGAATGATTAATGCAGATGGAGAATTTTT AGACCGATTATCTGCGAACTATGCGCTGAGCTTTGATCCAGACGAAAAAGCGCAATTCGATGTGCCGGCATTATTCTTAT TTGGGCGTCAAGATGATCATGTGGGATACGCAGACGGGCTTACATTGCTTGAAAAATATCTACATGCGTCGATTGCTATC CTTGATTTTGCAGGACATAATTTACAAATTGAACAACCAAAAATATTTACAACAATGGTAGAGGATTTCTTGTTCCGCGT GAAACCAGAATAA
Upstream 100 bases:
>100_bases GCAGAACCTGCATACATTTTGACAGAAGTTGGGGTTGGATACCGGATGGCAGAAGAATAATAATATGTTATGATAAAAAT AAACGCCAGGAGGAATTAAT
Downstream 100 bases:
>100_bases GTTAACCTTTGTGACCACCAACCATTTCAGACCGTTTTAAGCCAGTCGCTCCATTTAATAAACTGCTTGCATGCATAAGT GATTTAAAACCATAACGCGA
Product: hydrolase (esterase)
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Protein; Haloalkane Dehalogenase; LOW QUALITY PROTEIN Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDKESPFSRIYVDLPGMGKTENYDSIQNADHVLTLLLEF IEAVIPGEQFVLAGESYGGYLARGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSG VILTARNWNRFLAEVMAGMINADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQDDHVGYADGLTLLEKYLHASIAI LDFAGHNLQIEQPKIFTTMVEDFLFRVKPE
Sequences:
>Translated_270_residues MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDKESPFSRIYVDLPGMGKTENYDSIQNADHVLTLLLEF IEAVIPGEQFVLAGESYGGYLARGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSG VILTARNWNRFLAEVMAGMINADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQDDHVGYADGLTLLEKYLHASIAI LDFAGHNLQIEQPKIFTTMVEDFLFRVKPE >Mature_270_residues MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDKESPFSRIYVDLPGMGKTENYDSIQNADHVLTLLLEF IEAVIPGEQFVLAGESYGGYLARGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSG VILTARNWNRFLAEVMAGMINADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQDDHVGYADGLTLLEKYLHASIAI LDFAGHNLQIEQPKIFTTMVEDFLFRVKPE
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30584; Mature: 30584
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDKESPFSRIYVDLPGMGK CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEHHHHHCCCCCCCCEEEEECCCCCC TENYDSIQNADHVLTLLLEFIEAVIPGEQFVLAGESYGGYLARGIAAKMPDRVLGVLLIC CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHH PVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSGVILTARNWNRFLAEVMAGMI HCCCCCHHHHCCCHHHHEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH NADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQDDHVGYADGLTLLEKYLHASIAI CCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEE LDFAGHNLQIEQPKIFTTMVEDFLFRVKPE EEECCCCEEECCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDKESPFSRIYVDLPGMGK CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEHHHHHCCCCCCCCEEEEECCCCCC TENYDSIQNADHVLTLLLEFIEAVIPGEQFVLAGESYGGYLARGIAAKMPDRVLGVLLIC CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHH PVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSGVILTARNWNRFLAEVMAGMI HCCCCCHHHHCCCHHHHEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH NADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQDDHVGYADGLTLLEKYLHASIAI CCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEE LDFAGHNLQIEQPKIFTTMVEDFLFRVKPE EEECCCCEEECCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA