| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yjbR [C]
Identifier: 226225221
GI number: 226225221
Start: 2715478
End: 2715840
Strand: Reverse
Name: yjbR [C]
Synonym: Lm4b_02643
Alternate gene names: 226225221
Gene position: 2715840-2715478 (Counterclockwise)
Preceding gene: 226225222
Following gene: 226225220
Centisome position: 93.24
GC content: 41.32
Gene sequence:
>363_bases ATGAGCGATGAATTTGCTTGGATACAGAAGGAAATTAGTGGTCTTAAAGGAGTCCAGTATTCGTTTAAAGAAGAATGGGG AGCGGAGCGCTATCACGTTTTGGATCAGCTAATGGCAATGCGCGGAACGAATAAAGAAGGGCAGCCGATTTTAACCTTGA AGTGCGATGCCGAAAAAAGTGAGCAACTTCGCGCAGAAAATCGAGCCATCGTTCCCGGTTATTACATGAATAAACGAGTT TGGATTTCTGTTTTATTGGAAGAAGAACGAGATAAAGACTTGATTCGCGCATTAATTCAGCATGCGTACTCAGAAGCGAA GAATAAGTTGCCAAAATATAAACAAGCGGAACTTTTTGACTAA
Upstream 100 bases:
>100_bases GAGTGGAGACACCAGAACCTCGTGTGGCTGAGTGGGGCGGACGTGAACTGAATTTACTTGACCCAGATGGCAATAAGATT ATGATTTTGGAGCCCGCACA
Downstream 100 bases:
>100_bases TTTAGTTAAGAAGTTCTTATTTCTGTTATAATGAAATTGATTGTGAAAAAGAAAACAAAAAGGAGATGAAAAGATGGATA TTAATATGTTTATCCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTNKEGQPILTLKCDAEKSEQLRAENRAIVPGYYMNKRV WISVLLEEERDKDLIRALIQHAYSEAKNKLPKYKQAELFD
Sequences:
>Translated_120_residues MSDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTNKEGQPILTLKCDAEKSEQLRAENRAIVPGYYMNKRV WISVLLEEERDKDLIRALIQHAYSEAKNKLPKYKQAELFD >Mature_119_residues SDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTNKEGQPILTLKCDAEKSEQLRAENRAIVPGYYMNKRVW ISVLLEEERDKDLIRALIQHAYSEAKNKLPKYKQAELFD
Specific function: Unknown
COG id: COG2315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14097; Mature: 13966
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTNKEGQPILTLKCDAEKS CCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHH EQLRAENRAIVPGYYMNKRVWISVLLEEERDKDLIRALIQHAYSEAKNKLPKYKQAELFD HHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTNKEGQPILTLKCDAEKS CCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHH EQLRAENRAIVPGYYMNKRVWISVLLEEERDKDLIRALIQHAYSEAKNKLPKYKQAELFD HHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA