| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is gatA [C]
Identifier: 226225218
GI number: 226225218
Start: 2711655
End: 2712119
Strand: Reverse
Name: gatA [C]
Synonym: Lm4b_02640
Alternate gene names: 226225218
Gene position: 2712119-2711655 (Counterclockwise)
Preceding gene: 226225219
Following gene: 226225217
Centisome position: 93.11
GC content: 40.65
Gene sequence:
>465_bases ATGGATTTAGTACAATTTTTGAAAAAAGGAATGGTTTGGGTTCAATCGGATATCGAGAAACAAGAGGACCTATTCCAAAT GGTCGCAGAAAGTGGAAAGTCTGAAGGATATGTAACGGATGACTTTTTAACAAGACTAACAGACCGTGAACAAACCTTTC CAACGGGGCTAAAATTAGATGGATACGGCGTGGCATTACCGCACACGGATCCAGAATGCGTTACGGAACAATTTATCGCC GTAATCACTGTGAAAGATGGCATTCCATTTAAATTAATGGAAGATGCTGGTCAAACGGTTGAAGCGAATTTGATTTTCGT ACTCGGACTAAATGAACCTCACAGCCAGCTCGCGGTACTTCAGCAATTGATGGGGACGATTCAGGATAAAGACAATGTAG CCGCATTACTCAGAGCGAAAGATGAAGACGAAGTAAAACAAATTTTAGAAACTATTACCGTTTAA
Upstream 100 bases:
>100_bases GAACACAGAAGAAATGCACCAAATAATTAAAAACTTCACGGACTTGGAAACAAAAAAGACAATGTAGAGAAGTCAGAAAG AATTACAGGAGGATTTCGTA
Downstream 100 bases:
>100_bases AAAAAACAGGAAAATTAGCCGCGGGAAATCGCAGCAATTAATTAGGAGGAATTTATCATGGGACAATTTAAAATTTTGGT AGCTTGTGGAGCAGGAATTG
Product: PTS system galactitol-specific enzyme IIA component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Galactitol-Specific Transporter Subunit IIA; PTS System Galactitol-Specific IIA Component; PTS System Protein; PTS System IIA Component; PTS System Galactitol-Specific II A Component; PTS System Galactitol-Specific IIA Component; PTS Family Fructose/Mannitol Porter Component IIA; Galactitol PTS EIIA; PTS System Fructose-Specific II BC Component; PTS System IIBC Component; PTS Fructose-Specific IIA Component; PTS System Fructose-Specific EIIBC Component; PTS System Galactitol-Specific Component; PTS System Galacitol-Specific Transporter Subunit IIA; PTS System; Galactitol PTS; Pts System Galactitol-Specific Transporter Subunit IIa; PTS System Galactitol Specific IIA Component; PTS System Transporter Subunit IIBC; PTS System Transporter Subunit IIA; PTS System Mannitol-Specific Eiicba Component; Phosphotransferase System; PTS IIA-Like Protein Nitrogen-Regulatory Protein PtsN; PTS System IIa Component
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV
Sequences:
>Translated_154_residues MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV >Mature_154_residues MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 17201; Mature: 17201
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLD CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEC GYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVL CCEEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHCCCEEECEEEEEEECCCCHHHHHHH QQLMGTIQDKDNVAALLRAKDEDEVKQILETITV HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLD CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEC GYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVL CCEEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHCCCEEECEEEEEEECCCCHHHHHHH QQLMGTIQDKDNVAALLRAKDEDEVKQILETITV HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA