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The map label for this gene is hrtB [H]

Identifier: 226224921

GI number: 226224921

Start: 2418382

End: 2419485

Strand: Direct

Name: hrtB [H]

Synonym: Lm4b_02341

Alternate gene names: 226224921

Gene position: 2418382-2419485 (Clockwise)

Preceding gene: 226224920

Following gene: 226224922

Centisome position: 83.03

GC content: 37.23

Gene sequence:

>1104_bases
ATGTTTTTAGGGCTTCGTGAATTAGTTTATTCTAAGTTGCGCTATATTTTAGTAACAGGCATCATGGTCTTAATTATGTT
ACTATCACTTATTTTATCAGGGCTGGCAAACGGGCTGGCTTACGATAATGCTTCATCTGTAGCAGATAACGGGGTTCCAT
ATTATGTTCTCAGCAAAGACGCCCAAGACAAATTATCTCGATCTCAGTTCCCAGAATCCAAACTCGCTGATGTGAAAAAA
GATGCGAATGTAAAAGATGCTGCGGTTCTCGGTCAATCTATGCAAACGTTAAAACGGGAAAGTGACGATAAAAAGTTTAG
CGTCGCACTTTTCGGTATTCAACCAGATAGCTTTCTCGCTCCAAAAATTTCTGATGGAGCTAACATACAAGTGACAAAAC
CTGACGAAATCGTCGTTGATTCTTCCTTGAAATCAGACGGAATCAAAATTGGCGATGTTTTGATGGATGATATTTTGAAT
AGAGAATTAACGGTTGTCGGCTTTACGGAAAATCAAAAATATAGCCATGCTCCCGTTGTTTATATTAATATCGCGACTTG
GCAAGAAATCAATCCTGTTTTATATCACCAAAAAATCCCGCAAACAAGTACTATTGCGATTAAAACAGAAAATCCTGATA
AAGGCGTAACCCTTTCGGATAAAGATTTAACAACGATTGATCATAAAGGTTTCTTAAATCAAATTCCAGGTTATTCCGCG
GAACAAATGACGCTTAACATGATGATTTTCTTCTTAATCATTATTGGCGGATTTATTTTAACTGCATTCTTCTATGTCAT
GACGCTTCAAAAAACAACACAATTTGGTATTTTGAAAGCACTGGGTACGAAAACAAGTTACTTAGTTAAGAGCATTATTA
CTCAAGTGGTGATTATTTCAATTATTAGTATTTTAATTAGTGTCGGTGTAACGCTCCTGCTTCCAAGTATTATGCCAGCA
GCGATGCCGTTTAGATTAAGTCCGATGACGATTGCGCTTTATAGTGGTTTATTCTTTTTAGTTGCTCTGTTCGGCGCCCT
TCTATCACTTAGACGAATTGCTAAAGTAGATGCGTTAGATGCTATTCGAGGAGGTGATGAATAA

Upstream 100 bases:

>100_bases
TTTTTTAGGAAATTGAATATAGCTTTGGTATACTATTCTTTGGAAAGTGAAATAATGTTCATTTTCCGTTTACATAAATT
TAAAGGAGTTGGTATAACCG

Downstream 100 bases:

>100_bases
TGGAAACTCTACTATCTTTTGATAAAGTATATAAAGACTACCCGTCCGGCCCTTCAATTATTCATGCACTGAAGGAAACA
AACTTTGAAGCGAAAAAAGG

Product: ABC-transporter transmembrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKK
DANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN
RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLSDKDLTTIDHKGFLNQIPGYSA
EQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIISIISILISVGVTLLLPSIMPA
AMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALDAIRGGDE

Sequences:

>Translated_367_residues
MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKK
DANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN
RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLSDKDLTTIDHKGFLNQIPGYSA
EQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIISIISILISVGVTLLLPSIMPA
AMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALDAIRGGDE
>Mature_367_residues
MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKK
DANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN
RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLSDKDLTTIDHKGFLNQIPGYSA
EQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIISIISILISVGVTLLLPSIMPA
AMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALDAIRGGDE

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 40243; Mature: 40243

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCC
AQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLA
HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
PKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILNRELTVVGFTENQKYSHAPVV
CCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE
YINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLSDKDLTTIDHKGFLNQIPGYSA
EEEECCCHHCCHHHHHCCCCCCCEEEEEECCCCCCCEECCCCCCEECCCCHHHHCCCCCH
EQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IISILISVGVTLLLPSIMPAAMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRGGDE
HHCCCCC
>Mature Secondary Structure
MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCC
AQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLA
HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
PKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILNRELTVVGFTENQKYSHAPVV
CCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE
YINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLSDKDLTTIDHKGFLNQIPGYSA
EEEECCCHHCCHHHHHCCCCCCCEEEEEECCCCCCCEECCCCCCEECCCCHHHHCCCCCH
EQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IISILISVGVTLLLPSIMPAAMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRGGDE
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA