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The map label for this gene is oppB [H]

Identifier: 226224803

GI number: 226224803

Start: 2289277

End: 2290206

Strand: Reverse

Name: oppB [H]

Synonym: Lm4b_02222

Alternate gene names: 226224803

Gene position: 2290206-2289277 (Counterclockwise)

Preceding gene: 226224804

Following gene: 226224802

Centisome position: 78.63

GC content: 36.88

Gene sequence:

>930_bases
ATGGTTAAATATACGTTAAAAAGAGTATTATATATGCTTATAACGTTATTCATCATTGCTTCGGTTACGTTTGTTCTTAT
GAAATTCTTACCTGGTACGCCTTACCGTAATCAGGAGAAACTATCTGACGAACAAATTCACATGATGAATGAAAAATATG
GACTAAATGATTCAATTCCAGTCCAATACTTAAATTATATGACAGGTTTGGTAAAAGGTGACTTAGGTGTTTCCTTCCAA
CTTGATAATAGACCAGTGTCTGAGATTTTAAGTGCACTGATTGGTCCATCTGTCCAATTAGCACTCGAGGCAATGGCTTT
TGGTGTTATTTTTGGTATTTTACTAGGGGTAATAGCGGCCATGTATCAGAATAGGTGGCCGGATTATACGAGTACATTTA
TAGCAATATTAGGTAAGTCAGTTCCATCTTTCGTATTTGCGACTGTTTTACAATACTGGCTTGGAGCAAAACTTCAAATT
TTCCCAGTAGCAGGTTGGGGTACGTTTGCAGATACTATTCTGCCAGCATTCGCACTTGCGATGTTCCCGCTTGCAACAGC
AGCTCGTTTCATGAGAACAGAGTTAATTGATGTATTTGCATCTGATTATGTTCTACTTGCCAAAGCGAAAGGGAATAGTA
GAACGGAAGTAGCAGTTAAACATGCGATTCGTAATGCACTTATTCCTTTAATTACAGTTTTAGGACCATTATCAGTTGCA
CTGATGACTGGTTCCCTTGTTATTGAAAATATTTATAGTATTCCTGGTATCGGTAGCCAATTCGTTTCTTCTATTCAAAC
AAATGACTATCCAGTTATTATGGGAACTACAATTTTATTTGCTGTCATGTTGGTATTTGTTATCTTGGTAGTGGATATTC
TTTACGGATTGATTGATCCTCGAATCCGTGTGTCTGGAGGTAGAAAATAA

Upstream 100 bases:

>100_bases
TAAAAGTTTAGAAATGTAGAAAAAGGCTCACTAAACTTGCGAATTTGGTTAGGAATAACTTTTTTTATATATTAATTAAA
ACTGGGAGGTGTAGAGATAG

Downstream 100 bases:

>100_bases
TGGCAGAACATAAAATTGCAAAAGAAAGATTTCAGCCAGCACACATTCTGGATGCAGAAGCAGAGAAAATTAATCGTCCA
AGTTTAACTTTCTTGCAAGA

Product: oligopeptide ABC transporter (permease)

Products: NA

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQIHMMNEKYGLNDSIPVQYLNYMTGLVKGDLGVSFQ
LDNRPVSEILSALIGPSVQLALEAMAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQI
FPVAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVKHAIRNALIPLITVLGPLSVA
LMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTILFAVMLVFVILVVDILYGLIDPRIRVSGGRK

Sequences:

>Translated_309_residues
MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQIHMMNEKYGLNDSIPVQYLNYMTGLVKGDLGVSFQ
LDNRPVSEILSALIGPSVQLALEAMAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQI
FPVAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVKHAIRNALIPLITVLGPLSVA
LMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTILFAVMLVFVILVVDILYGLIDPRIRVSGGRK
>Mature_309_residues
MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQIHMMNEKYGLNDSIPVQYLNYMTGLVKGDLGVSFQ
LDNRPVSEILSALIGPSVQLALEAMAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQI
FPVAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVKHAIRNALIPLITVLGPLSVA
LMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTILFAVMLVFVILVVDILYGLIDPRIRVSGGRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=36.3934426229508, Blast_Score=214, Evalue=6e-57,
Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=37.0491803278689, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=31.7507418397626, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789888, Length=313, Percent_Identity=33.8658146964856, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787761, Length=341, Percent_Identity=31.3782991202346, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1787550, Length=331, Percent_Identity=26.5861027190332, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=25.2054794520548, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34008; Mature: 34008

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQIHMMNEKYGLNDSIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH
VQYLNYMTGLVKGDLGVSFQLDNRPVSEILSALIGPSVQLALEAMAFGVIFGILLGVIAA
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQIFPVAGWGTFADTILPAFALA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
MFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVKHAIRNALIPLITVLGPLSVA
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTILFAVMLVFVILVVDILYGLIDP
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIRVSGGRK
CEECCCCCC
>Mature Secondary Structure
MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQIHMMNEKYGLNDSIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH
VQYLNYMTGLVKGDLGVSFQLDNRPVSEILSALIGPSVQLALEAMAFGVIFGILLGVIAA
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQIFPVAGWGTFADTILPAFALA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
MFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVKHAIRNALIPLITVLGPLSVA
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTILFAVMLVFVILVVDILYGLIDP
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIRVSGGRK
CEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]