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The map label for this gene is 226224789

Identifier: 226224789

GI number: 226224789

Start: 2274905

End: 2275645

Strand: Reverse

Name: 226224789

Synonym: Lm4b_02207

Alternate gene names: NA

Gene position: 2275645-2274905 (Counterclockwise)

Preceding gene: 226224790

Following gene: 226224788

Centisome position: 78.13

GC content: 33.06

Gene sequence:

>741_bases
GTGAAAATAAAATCGTTTTTGGGGAAAAGTTTGACCTTGGTTGTGTTAGTGGTTTTTCTTTTTTCTGGATGGAAAATTGG
AATGGAACTGTATGAAAATAAGCATAACCAGACAATCCTAGATGATGCGAAAGCTGTTTACACAAAAGATGTTGCTACTA
CAAATGTGAATGGTGAAGTACGTGATGAGCTTAGAGATTTGCAAAAATTAAATAAAGATATGGTTGGGTGGCTGACGATT
GCAGATACGGAAATAGATTATCCAATTTTGCAAAGTACGGATAATGATTACTATTTACATCACAATTATAAAAATGAAAA
AGCACGAGCGGGCAGTATTTTTAAAGATTATCGGAATACGAATGAGTTTTTGGATAAAAATACGATCATTTATGGGCATA
ATATGAAAGACGGATCCATGTTTGCGGATTTACGTAAATACTTGGACAAAGATTTTTTGGCGGCTCATCCAACGTTTTCC
TATGAATCGAGCTTGGCGAATTATGAAGTGGAAATCTTTGCTGTGTATGAAACGACGACTGATTTTTATTACATTGAAAC
AGAATTTCCGGAAACAACTGATTTTGAGGATTATTTACAAAAAGTGAAACAACAATCTATGTATAAATTAAATGTAAAAG
TTAGTGGAAAGGACCGAATTATAACACTTTCAACTTGCGATACAGAAAAAGATTATGAAAAAGGACGGATGGTTATTCAA
GGAAAATTAGTAACAAAATGA

Upstream 100 bases:

>100_bases
GGAGCTGATTGCTGAAACTTATGGTGTAGTTGCGAAGGTTTTAAACGATGCGAACACTGGGAAATACATTGTTCCTCAAA
AGCGAAAGGAGTTTTAAAGA

Downstream 100 bases:

>100_bases
GAAAGCACCAAAATATAATAACTTTTGGCGCTTTTTCCTTTTTTGGAAAGGGTGCGAACGATGAAACTATATGAACTAAC
CGATAATTATTTAAAAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Sortase B Family Protein; Sortase B; Peptidase; SrtB Family Sortase; Sortase_B Family Surface Protein Cell Wall Anchor; Sortase SrtB; Sortase Domain-Containing Protein; Sortase Family Protein; Surface Protein Cell Wall Anchor; NPQTN Specific Sortase B; C60 Family Sortase B; Sortase

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDVATTNVNGEVRDELRDLQKLNKDMVGWLTI
ADTEIDYPILQSTDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFS
YESSLANYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKDRIITLSTCDTEKDYEKGRMVIQ
GKLVTK

Sequences:

>Translated_246_residues
MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDVATTNVNGEVRDELRDLQKLNKDMVGWLTI
ADTEIDYPILQSTDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFS
YESSLANYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKDRIITLSTCDTEKDYEKGRMVIQ
GKLVTK
>Mature_246_residues
MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDVATTNVNGEVRDELRDLQKLNKDMVGWLTI
ADTEIDYPILQSTDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFS
YESSLANYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKDRIITLSTCDTEKDYEKGRMVIQ
GKLVTK

Specific function: Unknown

COG id: COG4509

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28686; Mature: 28686

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDVATTNVNGEV
CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEHHCCHHHEECCCEEECCCCHH
RDELRDLQKLNKDMVGWLTIADTEIDYPILQSTDNDYYLHHNYKNEKARAGSIFKDYRNT
HHHHHHHHHHCHHHEEEEEEECCCCCCCCEECCCCCEEEEECCCCCCHHHCHHHHHHCCH
NEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFSYESSLANYEVEIFAVYETTT
HHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHHCCCCCCCHHCCCCCEEEEEEEEEEECC
DFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKDRIITLSTCDTEKDYEKGRMVIQ
CEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCHHCCCEEEE
GKLVTK
EEEECC
>Mature Secondary Structure
MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDVATTNVNGEV
CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEHHCCHHHEECCCEEECCCCHH
RDELRDLQKLNKDMVGWLTIADTEIDYPILQSTDNDYYLHHNYKNEKARAGSIFKDYRNT
HHHHHHHHHHCHHHEEEEEEECCCCCCCCEECCCCCEEEEECCCCCCHHHCHHHHHHCCH
NEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFSYESSLANYEVEIFAVYETTT
HHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHHCCCCCCCHHCCCCCEEEEEEEEEEECC
DFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKDRIITLSTCDTEKDYEKGRMVIQ
CEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCHHCCCEEEE
GKLVTK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA