| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224738
Identifier: 226224738
GI number: 226224738
Start: 2217113
End: 2217802
Strand: Reverse
Name: 226224738
Synonym: Lm4b_02155
Alternate gene names: NA
Gene position: 2217802-2217113 (Counterclockwise)
Preceding gene: 226224740
Following gene: 226224737
Centisome position: 76.14
GC content: 30.72
Gene sequence:
>690_bases ATGCAATCCGTATTTGAAGATTTGTATAGTAAAAAAATTTTGGAAGAAGAATTTGGTTATACATGCTTCTTGCAAACTTT AATCGATAACAGAATCCCTTATAAAAAAACAAGGATACCGAGCAACATGATTTTACTAACAGAGGATACAATAAATACAA AGGTTTATTTTATTGAAAAAGGGATAGTTTCATTAGAGAAGAATAAAAATGTTATAAGTTTTTTGGGATCAAACCAAATT GCTGGATTGAATGATTATTTTATGGCAGAAGCAAATCTATACACTGCTAGAGTTATCGAAACAATTACAGCATACGAATT TGATAAAGAAGATATAATTTGCTCGATTATTGGGATGCAAGAGGGGTGGCTCTATTTATATCTTAATAATCGAAATCACG AAAATGTTTTAATTGAAAAATGTAATTTAATGCGTGGTAATGGAGAAAATCGTTTGAAAGAGTCTCTAGAGCAGCTGGGA AGATATTTTGGAAATGAAAAGGAAGGCGTGCTACGCATTCCAAAATGTTTCACAAAGAAAATTATTGCTAATTATTCTAA CTTATCGGTGCGTTCAGTAACTCATCTTTGTAGAAAGTTGGTTGAATCAGGTTTTTTAGCAGAAAATTCTAAGTCTTTTG TTTTGTTGGATAAATACGGAAGAATAGAACCAGAAGTAACTACGATATAA
Upstream 100 bases:
>100_bases CTTTTAAAAGTGTTTGGTAGTATCATCACTTGTAAGAAGCCACTCATCGCATTATAAAACTATTTGCTAACAACATAAAA TAGAAATGAGATGACAATAA
Downstream 100 bases:
>100_bases TTATACTTGAGTAAAAGATAAACTATTTAATTTTTAGTTTATCTTTTTTCTTAGGGAGAAAAAATTACATCATAAAAAAA CAAGCAAAGTATTTTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQI AGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLG RYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI
Sequences:
>Translated_229_residues MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQI AGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLG RYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI >Mature_229_residues MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQI AGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLG RYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26506; Mature: 26506
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEK CHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEEEEEC GIVSLEKNKNVISFLGSNQIAGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQ CCEEECCCCCEEEEECCCCCCCCCHHEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECC EGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLGRYFGNEKEGVLRIPKCFTKK CCEEEEEEECCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHH IIANYSNLSVRSVTHLCRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEK CHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEEEEEC GIVSLEKNKNVISFLGSNQIAGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQ CCEEECCCCCEEEEECCCCCCCCCHHEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECC EGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLGRYFGNEKEGVLRIPKCFTKK CCEEEEEEECCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHH IIANYSNLSVRSVTHLCRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA