| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yvdK [H]
Identifier: 226224728
GI number: 226224728
Start: 2202782
End: 2205043
Strand: Reverse
Name: yvdK [H]
Synonym: Lm4b_02145
Alternate gene names: 226224728
Gene position: 2205043-2202782 (Counterclockwise)
Preceding gene: 226224729
Following gene: 226224727
Centisome position: 75.7
GC content: 39.3
Gene sequence:
>2262_bases ATGGCACAGAAGCAATTATTTGAAATCGAACCATGGACATTACGGACAACCAAACTAGATAAAGAAAATAAACGTTTGCA AGAAAGCCTAACTTCACTCGGTAATGGTTACATGGGGATGCGCGGGAATTTTGAAGAAGGATACTCCGGCGACGGCCATA TTGGAACTTATTATGCAGGCGTGTGGTTTCCAGATAAAACAAGAGTTGGTTGGTGGAAAAATGGCTACCCGGATTATTTC GGAAAAGTCATTAATGGCCTTAATTTTATCGGAATTGAAGTACGTCTTGACGGTGAAAAACTCGATTTATTTGTAGATGA AGTAAGCGATTTTGAACTTGTTTTAGATATGGAAAAAGGCGTTTTGAGACGTCAATTCACAGTAGTTAAAAATAATAAGA CATTCCGGATTTCGGCGGAACGATTCCTAAGTGTTGCAACGAAAGAACTTGCGGTTATTCGTTATCAAGTGGAAGCGAAG AGCGCTGCAAAAGTGGATTTAACGTCCTTTTTAGATGGCAATGTGCAAAACGAAGATGCCAACTATGAAGAAATGTTCTG GCAAGAAGTCGAAAAAGCTTCATCAGCAAGTCGCGGTTCACTTGTCACAAAAACTATTCCAAACAACTTTGGAACACCGC GTTTCACCGTTTCAGCTGTGATGGAAAATACGACCAATACGGCAAACCAAACAAATCAAACAAAGGCACTTTACGCCGAA AATCATTTTCAATTCGACCTAAAAGAAAATGAAGTAGCGCAAATAGAAAAACGTGTAGTCATTACGACATCTCGTGATTA TGAGGAAAGGGAAATTCTTCCAGCAGGAGAAAAAATCTTACAAAGCTTAGAAGCAAAAACGTATGATGAATTATTAGCCG CGCATGTTGCGGGTTGGCGTGAACGTTGGGATAAAGCGGATGTCGAGATTGCAGGCGACGATTCCGCGCAACAAGGTATC CGATTTAACATTTTCCAATTATTTGCTACTTATTACGGTGAGGACGCAAGACTAAACATTGGTCCTAAAGGCTTTACAGG CGAAAAATATGGCGGCGCGACATACTGGGATACAGAAGCTTTTGCACTACCAATGTATTTATCGTTAACGGATAAATCTG TGAGTCACAATTTACTTAAATATCGCCACGATCAATTGGATGGAGCGAAAATCAACGCGCAGAAAATCGGCCTAGCTGGC GCACTGTATCCAATGGTTACTTTTACCGGAGTCGAGTGTCATAATGAATGGGAAATTACATTTGAAGAAATTCACCGCAA TGGCGCGATTGCTTATGCGATTTACAATTACACAAATTACACTGGCGATGATTCGTATTTAAAAACAGATGGAATCGAAG TATTGACTGAAATCACTCGTTTTTGGGCCGACCGCGTTCATTTATCTGATCGCTTAGATAAATACATGATTCACGGTGTA ACGGGACCAAATGAATATGATAATAACGTCAGCAATAACTGGTATACAAACTATATCGCCGCTTGGACGATTCGTTATAC GCTAGAAAACTTAGATGCAGAAGCGAAAAAACGTTTAGGCGTGACCGAATACGAAATCGCCAAATGGGAAGATATCGAGC ATCGCATGTATTATCCTTTTGACGAGAAATGGCAGATTTTTGTGCAACACGATACGTTCTTAGATAAAGAGTTACGTTCC ACGGATACATTAAAACCAGAAGATATGCCGATTAACCAAAATTGGTCTTGGGATAAAATTTTACGTTCTTGTTTCATTAA ACAAGCAGATGTCCTTCAAGGTTTATATTTATTCTATGATGACTTTGATTTTGATACAAAACAACGTAACTTTGAATTCT ATGAGCCATTAACAGTACACGAATCTAGCTTATCGCCAGCTGTTCACGCAGTGTTAGCTTCAGAACTTGGTAAATATGAT AAAGCAGTAGAACTATACAAACGTACAGCAAGACTAGATCTTGATAACATTAACAACGATACAGAAGATGGACTGCACAT TACCTCTATGGCAGGAAGCTGGTTATCCATCGTTCAAGGCTTTGCTGGTATGCGAGTAACTGATGGCGAATTAAGCTTTG CACCATTCTTACCTGATGGCTGGGAAAATTACCGTTTCAAAATCAACTTCCGAGATCGTTTGTTAGAAGTGAAAGTAGAA AGAAATAGTGTGGAAATAACACTACTTGCAGGAAAAGCTTTTGAAATTAACTTATATGGAGAACCACAGGAGCTTCATTC AACTGTAAATGTAACTAAATGA
Upstream 100 bases:
>100_bases CGGAATGGTGTTAATGATAGCATGGACATTTTTAAAGACAAGATTTTATAAGACTAGTGAAAAAAGTATGGCTGCTAGTC GCTAATTAGGAGGTTTTAGT
Downstream 100 bases:
>100_bases AAAATGAAAAACTCGTATCAGATAGCCTGATGCGAGTTTTTTGATGATACTTTTTCGATACTTTTTGAAAGTTAATTTGT CTTATACTTAGTTTATCAGC
Product: maltose phosphorylase
Products: D-glucose; beta-D-glucose 1-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNFEEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYF GKVINGLNFIGIEVRLDGEKLDLFVDEVSDFELVLDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAK SAAKVDLTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVSAVMENTTNTANQTNQTKALYAE NHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAGEKILQSLEAKTYDELLAAHVAGWRERWDKADVEIAGDDSAQQGI RFNIFQLFATYYGEDARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKINAQKIGLAG ALYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTDGIEVLTEITRFWADRVHLSDRLDKYMIHGV TGPNEYDNNVSNNWYTNYIAAWTIRYTLENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRS TDTLKPEDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSLSPAVHAVLASELGKYD KAVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFAGMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVE RNSVEITLLAGKAFEINLYGEPQELHSTVNVTK
Sequences:
>Translated_753_residues MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNFEEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYF GKVINGLNFIGIEVRLDGEKLDLFVDEVSDFELVLDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAK SAAKVDLTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVSAVMENTTNTANQTNQTKALYAE NHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAGEKILQSLEAKTYDELLAAHVAGWRERWDKADVEIAGDDSAQQGI RFNIFQLFATYYGEDARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKINAQKIGLAG ALYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTDGIEVLTEITRFWADRVHLSDRLDKYMIHGV TGPNEYDNNVSNNWYTNYIAAWTIRYTLENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRS TDTLKPEDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSLSPAVHAVLASELGKYD KAVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFAGMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVE RNSVEITLLAGKAFEINLYGEPQELHSTVNVTK >Mature_752_residues AQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNFEEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYFG KVINGLNFIGIEVRLDGEKLDLFVDEVSDFELVLDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAKS AAKVDLTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVSAVMENTTNTANQTNQTKALYAEN HFQFDLKENEVAQIEKRVVITTSRDYEEREILPAGEKILQSLEAKTYDELLAAHVAGWRERWDKADVEIAGDDSAQQGIR FNIFQLFATYYGEDARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKINAQKIGLAGA LYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTDGIEVLTEITRFWADRVHLSDRLDKYMIHGVT GPNEYDNNVSNNWYTNYIAAWTIRYTLENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRST DTLKPEDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSLSPAVHAVLASELGKYDK AVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFAGMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVER NSVEITLLAGKAFEINLYGEPQELHSTVNVTK
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=474, Percent_Identity=24.4725738396624, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI1787575, Length=756, Percent_Identity=27.7777777777778, Blast_Score=269, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6325283, Length=456, Percent_Identity=21.7105263157895, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583760, Length=329, Percent_Identity=24.6200607902736, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 2.4.1.8
Molecular weight: Translated: 86758; Mature: 86627
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNFEEGYSGDGHIGTYYAG CCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE VWFPDKTRVGWWKNGYPDYFGKVINGLNFIGIEVRLDGEKLDLFVDEVSDFELVLDMEKG EECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEHHHC VLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAKSAAKVDLTSFLDGNVQNEDA HHHHEEEEEECCCEEEEEHHHHHHHHHHHEEEEEEEECCCCCCEEEHHHHHCCCCCCCCC NYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVSAVMENTTNTANQTNQTKALYAE CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEC NHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAGEKILQSLEAKTYDELLAAHVAGWR CCEEEECCCCHHHHHCCEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERWDKADVEIAGDDSAQQGIRFNIFQLFATYYGEDARLNIGPKGFTGEKYGGATYWDTEA HHCCCCCEEECCCCCHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCC FALPMYLSLTDKSVSHNLLKYRHDQLDGAKINAQKIGLAGALYPMVTFTGVECHNEWEIT EEEEEEEEECCCHHHHHHHHHHHCCCCCCEECHHHCCCHHHHHHHHEEECEEECCCCCEE FEEIHRNGAIAYAIYNYTNYTGDDSYLKTDGIEVLTEITRFWADRVHLSDRLDKYMIHGV HHHHHCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TGPNEYDNNVSNNWYTNYIAAWTIRYTLENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPF CCCCCCCCCCCCCCEEEEEEEEEEEEEHHHCCHHHHHHCCCCCEEHHCCCCCCCCEECCC DEKWQIFVQHDTFLDKELRSTDTLKPEDMPINQNWSWDKILRSCFIKQADVLQGLYLFYD CCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEE DFDFDTKQRNFEFYEPLTVHESSLSPAVHAVLASELGKYDKAVELYKRTARLDLDNINND CCCCCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC TEDGLHITSMAGSWLSIVQGFAGMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVE CCCCEEEEECCCHHHHHHHHHCCCEEECCCEEECCCCCCCCCCCEEEEEECCEEEEEEEE RNSVEITLLAGKAFEINLYGEPQELHSTVNVTK CCEEEEEEEECCEEEEEECCCHHHHHHHCCCCC >Mature Secondary Structure AQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNFEEGYSGDGHIGTYYAG CCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE VWFPDKTRVGWWKNGYPDYFGKVINGLNFIGIEVRLDGEKLDLFVDEVSDFELVLDMEKG EECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEHHHC VLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAKSAAKVDLTSFLDGNVQNEDA HHHHEEEEEECCCEEEEEHHHHHHHHHHHEEEEEEEECCCCCCEEEHHHHHCCCCCCCCC NYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVSAVMENTTNTANQTNQTKALYAE CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEC NHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAGEKILQSLEAKTYDELLAAHVAGWR CCEEEECCCCHHHHHCCEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERWDKADVEIAGDDSAQQGIRFNIFQLFATYYGEDARLNIGPKGFTGEKYGGATYWDTEA HHCCCCCEEECCCCCHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCC FALPMYLSLTDKSVSHNLLKYRHDQLDGAKINAQKIGLAGALYPMVTFTGVECHNEWEIT EEEEEEEEECCCHHHHHHHHHHHCCCCCCEECHHHCCCHHHHHHHHEEECEEECCCCCEE FEEIHRNGAIAYAIYNYTNYTGDDSYLKTDGIEVLTEITRFWADRVHLSDRLDKYMIHGV HHHHHCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TGPNEYDNNVSNNWYTNYIAAWTIRYTLENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPF CCCCCCCCCCCCCCEEEEEEEEEEEEEHHHCCHHHHHHCCCCCEEHHCCCCCCCCEECCC DEKWQIFVQHDTFLDKELRSTDTLKPEDMPINQNWSWDKILRSCFIKQADVLQGLYLFYD CCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEE DFDFDTKQRNFEFYEPLTVHESSLSPAVHAVLASELGKYDKAVELYKRTARLDLDNINND CCCCCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC TEDGLHITSMAGSWLSIVQGFAGMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVE CCCCEEEEECCCHHHHHHHHHCCCEEECCCEEECCCCCCCCCCCEEEEEECCEEEEEEEE RNSVEITLLAGKAFEINLYGEPQELHSTVNVTK CCEEEEEEEECCEEEEEECCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maltose; phosphate
Specific reaction: maltose + phosphate = D-glucose + beta-D-glucose 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]