Click here to switch to the map view.

The map label for this gene is 226224671

Identifier: 226224671

GI number: 226224671

Start: 2145284

End: 2145676

Strand: Reverse

Name: 226224671

Synonym: Lm4b_02086

Alternate gene names: NA

Gene position: 2145676-2145284 (Counterclockwise)

Preceding gene: 226224672

Following gene: 226224668

Centisome position: 73.67

GC content: 36.39

Gene sequence:

>393_bases
ATGAACTGGACACGTATAAGTAGTATTGTAATAGTTGGTTTTACAGCAATAGGAGCAATTTATGGTGGATTATCCATGGT
TTTCATGCCAAGTGGTGGTTTGCTATCTCTTTCAACTGGATTACTTGATGGTTCACCGTTCGTGGATTATTTAGTACCAG
GCATATTTTTATTCGTATTTGTTGGATTATTCCATTTAGCAGCACTCATTTATTTGCTGAAAAAATTACCACGAACGAAA
GAAGTCATGTTCGCAGCAGCGGCCGTGCTCGCAGTTTGGATGATTGTACAGTTACTGATTATCGGCTATGTATTTATTTT
ACAAATTATCTTTTTAGTTGTCGCAGCAGTAGAAATGTTTTTAGCGATACAATTAAAAAAACAGCAACGGTGA

Upstream 100 bases:

>100_bases
TTTTCGTATTGATCGATTTAATCAAAAAAATAAAACGAAGAAAAACGGCAGAATGAAAGTTTTCGTGGTATACTACTAGA
AAAACGACTAGGAGAACGCC

Downstream 100 bases:

>100_bases
AATAGAATTTAGTTAGGCTATTTTTTTCCTGAATTTAAGGGAGATAGATAGCCTAACTTTTTAGCTTTAGAAAACATAAT
TTATAAGCGCGAATGTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDGSPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTK
EVMFAAAAVLAVWMIVQLLIIGYVFILQIIFLVVAAVEMFLAIQLKKQQR

Sequences:

>Translated_130_residues
MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDGSPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTK
EVMFAAAAVLAVWMIVQLLIIGYVFILQIIFLVVAAVEMFLAIQLKKQQR
>Mature_130_residues
MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDGSPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTK
EVMFAAAAVLAVWMIVQLLIIGYVFILQIIFLVVAAVEMFLAIQLKKQQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14270; Mature: 14270

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDGSPFVDYLVPGIFLFVF
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGLFHLAALIYLLKKLPRTKEVMFAAAAVLAVWMIVQLLIIGYVFILQIIFLVVAAVEMF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIQLKKQQR
HHHHHHHCCC
>Mature Secondary Structure
MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDGSPFVDYLVPGIFLFVF
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGLFHLAALIYLLKKLPRTKEVMFAAAAVLAVWMIVQLLIIGYVFILQIIFLVVAAVEMF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIQLKKQQR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA