| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is yfeS [H]
Identifier: 226224353
GI number: 226224353
Start: 1805674
End: 1806228
Strand: Reverse
Name: yfeS [H]
Synonym: Lm4b_01764
Alternate gene names: 226224353
Gene position: 1806228-1805674 (Counterclockwise)
Preceding gene: 226224354
Following gene: 226224351
Centisome position: 62.01
GC content: 37.3
Gene sequence:
>555_bases ATGGCAATTACTATGTATATCGACCAGCCTGGTGCCTCGTTAAATTATGAGACAACACATCCACATTTCAAGGAACATTT TAAAGCGAGTTTTTATTTGGATGGTCAGGATAGCTATGGTCCATTTGGGTATAAAGATGGACTTGAAGTACTTCGACGTT TAGAAGAATATTTTAGTGATAAAAGTGATCAAGGACTCAATTTATCGTCTTTTCCAAAATACATGATGGAAACAGTGAAA AAAGCAAACTATGTTCCAGCGAAAGACGATGGTGTAGAACGATTGAAACAACTTTTGGCTGAGTTTGGCAGTGACGTACG TGCATCTGATAGAATTACTGTCTCAGCAGCTTTAGCTCAAATCAAAATCACGGGCTATATTTTACCTGCTCTTCGTGATG CGGCGCTGGAATCACTTCATCGCGAAATAGAATTGAACAAAATAGAAAATATTGATGCAGGTTATGCGGACAGTATGTTT TATGACTTATTAACCTTTACAAAAGACTATACATCTGTGTTACCAGATATGTGGTGCAGACATTGTACAGAATAA
Upstream 100 bases:
>100_bases AAAATTGTCATGAAATTGTCACCTTTTTTTCTTCTTTCAAAAAGGTAGATAGTCTGGTAAGATGAATGTATGAGATTTCA CATGAATGGAGGAAATGAGA
Downstream 100 bases:
>100_bases AAAAACAACGCTAAAATTAGCGTTGTTTTTTTACTTATCTAACATGGTTAAAATAGCTCGAGCAACTTCTTCTTGATTAC GATTATCCGTATTAACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGYKDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVK KANYVPAKDDGVERLKQLLAEFGSDVRASDRITVSAALAQIKITGYILPALRDAALESLHREIELNKIENIDAGYADSMF YDLLTFTKDYTSVLPDMWCRHCTE
Sequences:
>Translated_184_residues MAITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGYKDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVK KANYVPAKDDGVERLKQLLAEFGSDVRASDRITVSAALAQIKITGYILPALRDAALESLHREIELNKIENIDAGYADSMF YDLLTFTKDYTSVLPDMWCRHCTE >Mature_183_residues AITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGYKDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVKK ANYVPAKDDGVERLKQLLAEFGSDVRASDRITVSAALAQIKITGYILPALRDAALESLHREIELNKIENIDAGYADSMFY DLLTFTKDYTSVLPDMWCRHCTE
Specific function: Unknown
COG id: COG4884
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788760, Length=167, Percent_Identity=31.1377245508982, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016835 - InterPro: IPR008893 [H]
Pfam domain/function: PF05406 WGR [H]
EC number: NA
Molecular weight: Translated: 21007; Mature: 20876
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGYKDGLEVLRRLEEYFSD CEEEEEEECCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC KSDQGLNLSSFPKYMMETVKKANYVPAKDDGVERLKQLLAEFGSDVRASDRITVSAALAQ CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IKITGYILPALRDAALESLHREIELNKIENIDAGYADSMFYDLLTFTKDYTSVLPDMWCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HCTE HCCC >Mature Secondary Structure AITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGYKDGLEVLRRLEEYFSD EEEEEEECCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC KSDQGLNLSSFPKYMMETVKKANYVPAKDDGVERLKQLLAEFGSDVRASDRITVSAALAQ CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IKITGYILPALRDAALESLHREIELNKIENIDAGYADSMFYDLLTFTKDYTSVLPDMWCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HCTE HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]