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The map label for this gene is yvqK [H]

Identifier: 226223809

GI number: 226223809

Start: 1212953

End: 1213519

Strand: Direct

Name: yvqK [H]

Synonym: Lm4b_01213

Alternate gene names: 226223809

Gene position: 1212953-1213519 (Clockwise)

Preceding gene: 226223808

Following gene: 226223812

Centisome position: 41.64

GC content: 41.27

Gene sequence:

>567_bases
ATGCGTATCTACACAAAAACCGGCGATAAAGGAATGACAAGAATTATCGGGGGTAGCAAAGTAAGTAAAGATAATATCCG
TATCGATGCATATGGAACTTTGGATGAACTTAATTCGCTGATTGGCTACACGATAACAACACTTGGGGCTGAACCAGAAA
TTCAAGCCGAACTCGAACAAATTCAACAGCAATTATTTGATGCAGGAGGGGATCTTGCAACCGAAGAAGGCAAGCGTGCG
TATAAATTAACAAGTGAGCCTGTTGCGTGGCTAGAAGACCGAATTGACATCTACGCCGATGAACCCCCAGAAATAGAAAA
ATTTATCCTACCAGGTGGAACGCAAGCAGCCTCATTACTGCACATGGCTAGAACCGTAACAAGAAGAGCTGAACGCGAAA
TCGTCGGTATGTTAAAAATTGCTTCAAGTAACGAAGAAGTATTAAAATACGTCAACCGTTTATCGGATTACTTTTTTGCC
GTTGCCAGAGTCGTCAATTACCGCGCTGGTGAAACAGACATTTTTTACAAAAATTCCGAACTCGTTTTCCGCAATAAAAA
GAAATAA

Upstream 100 bases:

>100_bases
TGAAAGAACACAAAGAACAAGAATACGACAAACTAGCGGCCCTTTTAGAAGCAAATATTCAAATGGACCAACTAGAAAAA
ATCATGAAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
TAAAAAACCTCTCCAGACATCAAAGCCGGAGAGGTTTTCCTTTTTTAAAAACGTTGAATTAAAAATACACCAACAAGCAT
TAATAAAACACCAATCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRA
YKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA
VARVVNYRAGETDIFYKNSELVFRNKKK

Sequences:

>Translated_188_residues
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRA
YKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA
VARVVNYRAGETDIFYKNSELVFRNKKK
>Mature_188_residues
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRA
YKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA
VARVVNYRAGETDIFYKNSELVFRNKKK

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=185, Percent_Identity=38.3783783783784, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI115534154, Length=186, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 21204; Mature: 21204

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQ
CEEEECCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLL
HHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHCHHEECCCCCCCCEEECCCCHHHHHHH
HMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
LVFRNKKK
EEECCCCC
>Mature Secondary Structure
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQ
CEEEECCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLL
HHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHCHHEECCCCCCCCEEECCCCHHHHHHH
HMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
LVFRNKKK
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]