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The map label for this gene is pduA [H]

Identifier: 226223760

GI number: 226223760

Start: 1170354

End: 1170629

Strand: Direct

Name: pduA [H]

Synonym: Lm4b_01164

Alternate gene names: 226223760

Gene position: 1170354-1170629 (Clockwise)

Preceding gene: 226223759

Following gene: 226223761

Centisome position: 40.18

GC content: 43.84

Gene sequence:

>276_bases
ATGAATAATGCACTTGGAATGATTGAAACTAAAGGTCTTGTTGGCGCAATTGAAGCAGCTGACGCAATGGTAAAAGCAGC
AAATGTATCACTAGTAGGGTATGAAAAAATCGGTTCAGGTCTTGTAACTGTTATGGTTCGCGGTGATGTTGGTGCAGTAA
AAGCAGCAACCGATGCAGGCGCAGCAGCAGCTCGTAACGTTGGCGAAGTACAATCTATCCACGTTATCCCACGTCCACAC
AATGATGTAGAAACGTTGCTACCAAAAGGTCTATAA

Upstream 100 bases:

>100_bases
ATGTCATGACCCGCTTTGCCCACGAGTAAAAGGGGATCCAAGACAAGATTGTATCCATTTTGAAGAAGAGAAGTAAACCC
AATTTGAGGAGGAAATAATA

Downstream 100 bases:

>100_bases
GCCGTGGAAAGAGAAGAATTAAAAGCAATAATCAAGCAAATAGTAACAGATAAACTTAGTGGTGTGGAAACAGAGATTCC
TATTGGAGTCTCTAACCGCC

Product: carboxysome structural protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

Sequences:

>Translated_91_residues
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL
>Mature_91_residues
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=89, Percent_Identity=69.6629213483146, Blast_Score=105, Evalue=5e-25,
Organism=Escherichia coli, GI87082105, Length=87, Percent_Identity=50.5747126436782, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9192; Mature: 9192

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAG
CCCCCCCEECCCCEEHHHHHHHHHHHCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCCC
AAAARNVGEVQSIHVIPRPHNDVETLLPKGL
CHHHCCCCCCEEEEEECCCCCCHHHHCCCCC
>Mature Secondary Structure
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAG
CCCCCCCEECCCCEEHHHHHHHHHHHCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCCC
AAAARNVGEVQSIHVIPRPHNDVETLLPKGL
CHHHCCCCCCEEEEEECCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]