| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223693
Identifier: 226223693
GI number: 226223693
Start: 1108378
End: 1110480
Strand: Direct
Name: 226223693
Synonym: Lm4b_01095
Alternate gene names: NA
Gene position: 1108378-1110480 (Clockwise)
Preceding gene: 226223692
Following gene: 226223694
Centisome position: 38.05
GC content: 32.05
Gene sequence:
>2103_bases GTGAAGAATAGGTTAGCTTATATTTTTAATGCGTTTTTTATACTTATTTTTGGTTACTTACTTTGCATAAGCATTTTTAA ACCGCTAGAAATTAGTTTTAATCATCCGAGTATATTTATATTATTTAGTGCTGCGGCGCTTTTAGTACTTATAGGATTCT ATCAATTTTCTACTAGATTGAATACAAAAGGAGATGGTGTAATAACCATCTTTTTGGTTAGCTTGATTATATTAACTCAA ATTTATTTGCTTTTCTCCTTGCAAATGAATTCATATGCAGATGCTTTTCTTATCAAGGGAGAAGCATTGAATATGCTTTC TAATGGAGGGCATGCAACAACGCAGAATTATTTTTTAATGTATCCTAATAATATATTTATAACAATTATTCGATACTGGC TATATTCTGTTGGAGGGACGCTTGGTATTACTAATACGTATTTATTAGAAAGTGCTTTCCTTTTTGTTTGTATGAATATT ACTATTTTTGTATTGTACTGGATTGTTCGTAAAGAAAATGGTAATAAATTTGGGAACATCTACTTATTAATTGTTTTATT CTGTGTGCCATTATTTGGTTATATTTGGTATTTCTATACAGATACACTTGTACTGCCATTTACAGCGCTGATTGCCTTAT TTTATTATCTATACACGAAAAGTAGTAAATGGTGGTATTTCATCATTATTGGGCTGCTGTTTGCAGTAGGTTATCAAATT AAGCCGAATATCATCATTTTACTTCCAGCAATGCTTATTCATTTATGTTTTATAAGAAATTGGCGTAAAATTCTATTGAA CACGGTCATCGTAGCAATTTGCTTTTTCGGTTTAAGCACTGTTTTTACACCAATCGCAGAGAGTTATGACTTTAAGAAAG ACCCAACCATTGAATTTCCTCAAACACATTGGATTATGATGGGGCTTGGCGATCCAGCCGGTCGTTATAACAGCAATGAT GTTGCTTATACTTCACAATTTAAAACAAAAGAAGAAAAAGAAGAAGCCAATATTGAAAAAATTAAAGAACGTATTGAAGA ACATGGACCGCTTGGCTTAATAAAGCTTTTTGATAATAAGGTGTTAAATACTTGGACAGACGGAACGCGAGCATATACGT GGTATGTTAATGCTGCACTTGATTATCCAGCTCCTTATGATTACTTCTTTGGAGATAAACGGGTTGTCACTGAATTACCT GCTCAGCTGTTCCATATTATTAATTTGTTTTTAATTTGTCTAGGTGCTTTACGTTTTTATAAGAAAAGGGAATTTGATAT GTCCTTTTTCGTTAATATTTCGCTAGTAGGTGTTTGGCTATTCCACTTATTCTGGGAAGCAAATCAGCGTTATATTATGT TTATTACGCCATTAATGATCTTGTCCTCTATATATGGGTTTAAATTTATAGTAGAATCTTTATATACGAAAAAATTTGAT TTGAAAAAAGGGCTAAGAAAAGGCTTTTTAATCGCGAGTTTCTGCGTATTTTTATTAAGTACAGTTGCTTTTGCTTTTAT TGGAAATTCGGTAGCAGGCGAGTCACAGGATATCAATAAATATCTTGTAAAACAAAGTTATGCGCATATAGATCTTCCTG TTACTAGCAAACAAATTGTTAAGCAAACGTTTAATGTAGATTCGCCGTTCAATTCTATCCAAATAGCGGTTCTAAAAGAG CCAGATGAAGCTAGTAAATATCGTTTGAAAGTTGTAGATAAGACAAATAAGAAGGATATTTACGATGAAGTTATAGCTGG ATCAGATTTTGTAGAAGCTACAAATTACCAAATTAATGTAAATGAAAAGCCAAAAGGTAAAACTGAATATGTTATTGAAG TCTATCAAGTGGAAAATAAAAACCCTGAAAAACCATTAGTTTTAGGTACCTATACTCCAGATGCAGTAGATCTTTATCCG TATGGAGCACTGTATGTTAATGGTGTTAAAAAAGAGAAGCAAGATATGGGCTTCACTGTCTCACATGTTGCTTCTGAACC AATAATACCGAAATATGTCTCCGCTATTTTTGATTTGGGTGTTATAATTATTTTTGCAGGAACATATTATGTGTTTAGAA GGAAAACTGGAGATAATAGATGA
Upstream 100 bases:
>100_bases TTAAACAAGTAAAAGAACGACCTCGTTTTACTATTGAAGAGAATGTTTTTGAAACAAAATGCAAAGAAAATAAAATCAGC GAGAGATAGGTGTAAAGAGA
Downstream 100 bases:
>100_bases CATATATTTTGAATTAGGGAGAGTCTATAAATGAACAGTGATTCAAATAATAACATCAATAAGAATCGAGAAGCGGGAAT AAGTATTATTATTCCATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MKNRLAYIFNAFFILIFGYLLCISIFKPLEISFNHPSIFILFSAAALLVLIGFYQFSTRLNTKGDGVITIFLVSLIILTQ IYLLFSLQMNSYADAFLIKGEALNMLSNGGHATTQNYFLMYPNNIFITIIRYWLYSVGGTLGITNTYLLESAFLFVCMNI TIFVLYWIVRKENGNKFGNIYLLIVLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFIIIGLLFAVGYQI KPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIAESYDFKKDPTIEFPQTHWIMMGLGDPAGRYNSND VAYTSQFKTKEEKEEANIEKIKERIEEHGPLGLIKLFDNKVLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELP AQLFHIINLFLICLGALRFYKKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFITPLMILSSIYGFKFIVESLYTKKFD LKKGLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSYAHIDLPVTSKQIVKQTFNVDSPFNSIQIAVLKE PDEASKYRLKVVDKTNKKDIYDEVIAGSDFVEATNYQINVNEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYP YGALYVNGVKKEKQDMGFTVSHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR
Sequences:
>Translated_700_residues MKNRLAYIFNAFFILIFGYLLCISIFKPLEISFNHPSIFILFSAAALLVLIGFYQFSTRLNTKGDGVITIFLVSLIILTQ IYLLFSLQMNSYADAFLIKGEALNMLSNGGHATTQNYFLMYPNNIFITIIRYWLYSVGGTLGITNTYLLESAFLFVCMNI TIFVLYWIVRKENGNKFGNIYLLIVLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFIIIGLLFAVGYQI KPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIAESYDFKKDPTIEFPQTHWIMMGLGDPAGRYNSND VAYTSQFKTKEEKEEANIEKIKERIEEHGPLGLIKLFDNKVLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELP AQLFHIINLFLICLGALRFYKKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFITPLMILSSIYGFKFIVESLYTKKFD LKKGLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSYAHIDLPVTSKQIVKQTFNVDSPFNSIQIAVLKE PDEASKYRLKVVDKTNKKDIYDEVIAGSDFVEATNYQINVNEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYP YGALYVNGVKKEKQDMGFTVSHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR >Mature_700_residues MKNRLAYIFNAFFILIFGYLLCISIFKPLEISFNHPSIFILFSAAALLVLIGFYQFSTRLNTKGDGVITIFLVSLIILTQ IYLLFSLQMNSYADAFLIKGEALNMLSNGGHATTQNYFLMYPNNIFITIIRYWLYSVGGTLGITNTYLLESAFLFVCMNI TIFVLYWIVRKENGNKFGNIYLLIVLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFIIIGLLFAVGYQI KPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIAESYDFKKDPTIEFPQTHWIMMGLGDPAGRYNSND VAYTSQFKTKEEKEEANIEKIKERIEEHGPLGLIKLFDNKVLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELP AQLFHIINLFLICLGALRFYKKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFITPLMILSSIYGFKFIVESLYTKKFD LKKGLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSYAHIDLPVTSKQIVKQTFNVDSPFNSIQIAVLKE PDEASKYRLKVVDKTNKKDIYDEVIAGSDFVEATNYQINVNEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYP YGALYVNGVKKEKQDMGFTVSHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80698; Mature: 80698
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRLAYIFNAFFILIFGYLLCISIFKPLEISFNHPSIFILFSAAALLVLIGFYQFSTRL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHCC NTKGDGVITIFLVSLIILTQIYLLFSLQMNSYADAFLIKGEALNMLSNGGHATTQNYFLM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCEEEE YPNNIFITIIRYWLYSVGGTLGITNTYLLESAFLFVCMNITIFVLYWIVRKENGNKFGNI ECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH YLLIVLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFIIIGLLFAVGYQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIAESYDFKKDPTIEFP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC QTHWIMMGLGDPAGRYNSNDVAYTSQFKTKEEKEEANIEKIKERIEEHGPLGLIKLFDNK CCEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHCCEEEEEECCCC VLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELPAQLFHIINLFLICLGALRFY HHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFITPLMILSSIYGFKFIVESLYTKKFD HHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LKKGLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSYAHIDLPVTSKQIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHH KQTFNVDSPFNSIQIAVLKEPDEASKYRLKVVDKTNKKDIYDEVIAGSDFVEATNYQINV HHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEECCEEEEC NEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYPYGALYVNGVKKEKQDMGFTV CCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCEEEECCCHHHHHHCCEEH SHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR HHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC >Mature Secondary Structure MKNRLAYIFNAFFILIFGYLLCISIFKPLEISFNHPSIFILFSAAALLVLIGFYQFSTRL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHCC NTKGDGVITIFLVSLIILTQIYLLFSLQMNSYADAFLIKGEALNMLSNGGHATTQNYFLM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCEEEE YPNNIFITIIRYWLYSVGGTLGITNTYLLESAFLFVCMNITIFVLYWIVRKENGNKFGNI ECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH YLLIVLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFIIIGLLFAVGYQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIAESYDFKKDPTIEFP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC QTHWIMMGLGDPAGRYNSNDVAYTSQFKTKEEKEEANIEKIKERIEEHGPLGLIKLFDNK CCEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHCCEEEEEECCCC VLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELPAQLFHIINLFLICLGALRFY HHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFITPLMILSSIYGFKFIVESLYTKKFD HHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LKKGLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSYAHIDLPVTSKQIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHH KQTFNVDSPFNSIQIAVLKEPDEASKYRLKVVDKTNKKDIYDEVIAGSDFVEATNYQINV HHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEECCEEEEC NEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYPYGALYVNGVKKEKQDMGFTV CCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCEEEECCCHHHHHHCCEEH SHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR HHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA