| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223684
Identifier: 226223684
GI number: 226223684
Start: 1093940
End: 1094221
Strand: Direct
Name: 226223684
Synonym: Lm4b_01086
Alternate gene names: NA
Gene position: 1093940-1094221 (Clockwise)
Preceding gene: 226223682
Following gene: 226223685
Centisome position: 37.56
GC content: 35.82
Gene sequence:
>282_bases ATGGCAAATAAAAAGATAGATCACAGAGAAGAGGCAGTGGAGCTTTTAAAGCAAGACGCAAAACGAATCTTACAGTTGAT TAAAGTTCAAATGGATAATCTAACATTACCGCAATGTCCAGCATATGAGGAAGTTCTTGATACACAAATGTATGGTTTAT CACGTGAAATTAACTTTGCAACCCGCCTAGGACTAATTGAACCAGAAGAAGGCAAGAAACTAATGTCTACACTGGAAAAA GAATTGTCCACTTTACATGAACTGTCCATGAGTAAAAAATAA
Upstream 100 bases:
>100_bases TTATGCTATACTAGTACTATCTAGTATTAACTTTTACTTAAGGTTTTTCCTTGAGATGAAAATAAAGCGCTACTTTTGGC GTATGATAGGGGGTTCTGTG
Downstream 100 bases:
>100_bases TGAATCAATTGAAAAGATGTCTGATTTTTTCTGACATCTTTTTTTGTTTGCCAGCGAAAGATTAAAAAATGAGCCAAAAG AAGGAGGCGATTCTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEK ELSTLHELSMSKK
Sequences:
>Translated_93_residues MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEK ELSTLHELSMSKK >Mature_92_residues ANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEKE LSTLHELSMSKK
Specific function: Unknown
COG id: COG4838
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0358 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009983 [H]
Pfam domain/function: PF07408 DUF1507 [H]
EC number: NA
Molecular weight: Translated: 10744; Mature: 10613
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRLGLIEPEEGKKLMSTLEKELSTLHELSMSKK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRLGLIEPEEGKKLMSTLEKELSTLHELSMSKK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA