Click here to switch to the map view.

The map label for this gene is 226223679

Identifier: 226223679

GI number: 226223679

Start: 1088871

End: 1089485

Strand: Reverse

Name: 226223679

Synonym: Lm4b_01081

Alternate gene names: NA

Gene position: 1089485-1088871 (Counterclockwise)

Preceding gene: 226223683

Following gene: 226223678

Centisome position: 37.4

GC content: 39.35

Gene sequence:

>615_bases
ATGACTTTTAAAGGATTTAGTAAGAAAGATTTTAAAACAATGCAAATTCCTGGGCTTGAAGCACGTATGAACGGAATTCA
AACGGATATCCAACCAAAATTCAGAGCTGTTGGGGAAGAATTGACTACTTATTTAAGTGCCAAGCTTGGCGATGAAATGT
TTTTACATATTGCTCGTCACCAAAGACGTTCAGTTAACCCACCCGAAAGCACTTGGCTGGCCATTTGCCATGATAAACGT
GGATATAAAAAGCACCCTCATTTCCAAGTGGGTCTATTCGATAATTATTTATTCATTTGGCTCGCTTTTATTTATGAAAA
TGAAGAAAGCGCGAAAATCGCCAATCGCTTCTTGAAAGAAAAGAAATTATTGGCTGATTTACCGGATAACTTTGCCATTT
CTCCAGATCACACAGAGGAAAAGACGTATCCGGTACACGACGGACAACTAAAGGCCACGCTTGAACGATTCCGTGATGTG
AAAAAAGGAGAATTCTTAGTTGGGAAAATTTATCTACCAGATGATAGCCATTTATCCCCAGGGAAAGACTTCATTAAAGA
GGCAGAAATGGTCCTTGACGAGCTAATTCCGCTCTATAAGGCTTCCCTTCAATAA

Upstream 100 bases:

>100_bases
TTTTATCACAAAAATGAATTATCTGAATAGAACAAGATTCTTTCACTTAGAACTTAACTTCCGTATAATGAAACTATATG
CAAAATTAGGAGGAAAACAG

Downstream 100 bases:

>100_bases
AAGATGTACAAATGACTATAATCTAGGTATAATGGTAGAGTTGTGAATTACTATGGTTTGAAGGAGTTGAGGAACGTGAA
AAAGGAGCAGCAAACAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTYLSAKLGDEMFLHIARHQRRSVNPPESTWLAICHDKR
GYKKHPHFQVGLFDNYLFIWLAFIYENEESAKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDV
KKGEFLVGKIYLPDDSHLSPGKDFIKEAEMVLDELIPLYKASLQ

Sequences:

>Translated_204_residues
MTFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTYLSAKLGDEMFLHIARHQRRSVNPPESTWLAICHDKR
GYKKHPHFQVGLFDNYLFIWLAFIYENEESAKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDV
KKGEFLVGKIYLPDDSHLSPGKDFIKEAEMVLDELIPLYKASLQ
>Mature_203_residues
TFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTYLSAKLGDEMFLHIARHQRRSVNPPESTWLAICHDKRG
YKKHPHFQVGLFDNYLFIWLAFIYENEESAKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDVK
KGEFLVGKIYLPDDSHLSPGKDFIKEAEMVLDELIPLYKASLQ

Specific function: Unknown

COG id: COG4493

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0637 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009403 [H]

Pfam domain/function: PF06335 DUF1054 [H]

EC number: NA

Molecular weight: Translated: 23660; Mature: 23529

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTYLSAKLGDEMFLHIARH
CCCCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRRSVNPPESTWLAICHDKRGYKKHPHFQVGLFDNYLFIWLAFIYENEESAKIANRFLKE
HHCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDVKKGEFLVGKIYLPDDSHLSP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
GKDFIKEAEMVLDELIPLYKASLQ
CHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTYLSAKLGDEMFLHIARH
CCCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRRSVNPPESTWLAICHDKRGYKKHPHFQVGLFDNYLFIWLAFIYENEESAKIANRFLKE
HHCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDVKKGEFLVGKIYLPDDSHLSP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
GKDFIKEAEMVLDELIPLYKASLQ
CHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA