Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223617
Identifier: 226223617
GI number: 226223617
Start: 1031021
End: 1031812
Strand: Direct
Name: 226223617
Synonym: Lm4b_01019
Alternate gene names: NA
Gene position: 1031021-1031812 (Clockwise)
Preceding gene: 226223614
Following gene: 226223620
Centisome position: 35.4
GC content: 32.2
Gene sequence:
>792_bases ATGTTAGAAAAAAACTACAAATTTTTACTTTGGATTTATATATTCTGGTTTTTAGGTAGCGTTTTGTTAGTATCCTTACA CATTATTCCACCAGAGCTAACTGCAGTGCAATCATTATTTTTAGTATTTACTGGTGTTTTTGCGGCTGTTTTCTTTATTA TGCAATATGGTAAATGGCTTGGTTCTGCTATAACGTTACTTATATTTGTTGTCAGTACTTGTATTGAATGGATGCAACTA AGTTATACAGATGAATATATTGGTTCAACGTTAGGTGGAAGTGTTTACGGAATTCCTATTACAATGGGCTTTATTTGGGT CGGAATGGTTGCCGGGACGCATATTATCGCTCGGGAAATTACATTGAAAATTAATATTGACTGGATTCGTGGAGGTATTT ATTCGTTTATCGCAGCAACGATGGTAATGATTTTTGAGGTTTTAATCGAACCAATTACAATGCAATCAAAACAACTTTAC ATTACGCAAAACGGCTTCACGATTTTGCAGTTATCTGACTTTATTAATTGGTGGCTTTTAGGACTTATTTTACATTTAAT GATTTACTTTATTTTGAGTTTAACGGATAGTTGGGAGCGTCTTAAATATCCAGATTTAAAATCAGAAATTGTCATCGTTT ATTGGATTATTATTGCCTTTTTCGTATTTTTGTCCTTTTACCTTGATTTATGGACATCTATTGCGATTATTATCGTTTCT AATATTATTTTCACTGCTTGTTATTTTTTCAGTTTGGAAAAAGAAGCGCAGCCTAAAAAGAAATCCGAATGA
Upstream 100 bases:
>100_bases AAACAAATGAAATCGTTTGGCAACAATTAAACAAAAGATAAGATAAAAGTTGTGGAATTTAATAAATCCTATATAATGAA AAAATAGGAGTGGTTCATAG
Downstream 100 bases:
>100_bases TTACTCGGATTTCTTTTCTTTTTGTAAAAATTTCTGGGTTGCGATTTGCGCATTTTCAATAATAAATGGAAGCGAGCTAC CCGACATCGCGCCTGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS NIIFTACYFFSLEKEAQPKKKSE
Sequences:
>Translated_263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS NIIFTACYFFSLEKEAQPKKKSE >Mature_263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS NIIFTACYFFSLEKEAQPKKKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30448; Mature: 30448
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHH GLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIIFTACYFFSLEKEAQPKKKSE HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHH GLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVS HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIIFTACYFFSLEKEAQPKKKSE HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA