Click here to switch to the map view.

The map label for this gene is ykrP [H]

Identifier: 226223613

GI number: 226223613

Start: 1026220

End: 1027251

Strand: Reverse

Name: ykrP [H]

Synonym: Lm4b_01015

Alternate gene names: 226223613

Gene position: 1027251-1026220 (Counterclockwise)

Preceding gene: 226223615

Following gene: 226223612

Centisome position: 35.27

GC content: 32.85

Gene sequence:

>1032_bases
ATGGAACAAACCGCCTTAAAGCGGGAAAGTTATTTCGACAATGCCAAGTTTATTCTAATTTTTCTAGTTGTTTTCGGACA
TTTTCTCCAAACATTTATCGCGGATTATGCGGGTGTTCGTGTGCTTTATATTTATATCTACACGTTTCACATGCCTGCTT
TCGTGCTAATATCCGGATTTTTCGCTAAAAGTTTTGGTAAGCCCGGTTATTTAAAAAAGACGATGAAAAAGCTCATTTTA
CCTTATGTGTTTTTTCAGCTAATATATAGTATTTTTTATTATTTTCTTTTAAGTAAAGACAATCTTTCTATCCAATTCCT
TGATCCTGAATGGTCACTTTGGTTTTTACTAAGTTTGTTTTTCTGGAATATAATGTTATTTATTTTTGCAAAAATAAAGC
CTTGGAAGTCGATTTGCATTGCTCTCTTCGTTGGATTGGTTGCTGGCTATTTTGATATTATTGGGGGGTATTTGAGTTTA
TCTCGGACACTTGTTTTTTTCCCGTTTTTCTTAGTTGGCTATTTTTTAAAGAAAGAACATTTTTATTACCTTAAAACGCA
TTTTGTCATGATTCTCGGGGGCATTTTCATTGTTTTACTTCTATCATTTATTACATTTCACCCTAACTTAAATGATAAAT
GGTTTTTAGGTTCTAAGCCTTATGCAAACTTTGTGGAAGTAAAGTCGTTAGGTCTATTCATTCGCGCACTTGTCTACTTG
ATTAGTTTTGGTTCGATTGCGGCTTTTTTCAGTTTTATTCCTAGAAAGAGGTTATTTTTCACTAAATGGGGTAAAAATAC
GTTATATGTTTATTTGTTGCATGGCTTCTTTATTAAGTTTTTTCGTGAAGGTAGTCAAACTGACTTTCAATATAGCCCAT
CAACATTTTTACTTCTATTCGTCGTTACTTTTGTTTTAACGGTATTATTATCAAGTCGATTGGTAAAAATATTCGTTCAA
CCGGTAATCGAACTTAGGGTATCTATGCTGCGAGATGTGTTTAGCCGCTTAACAAAACGGGAAAGTTATTAA

Upstream 100 bases:

>100_bases
ATTTGATACTTTTTGTTACTTAACTGTTGGATAAGCGTTACAGAATTCAGGGTAAAATAAACAATAGTTTGTCAACATAG
AATAGAAAGGACTGTTTTTT

Downstream 100 bases:

>100_bases
ACGTATAGATAGAAAAAGGAGGTTGTATTATGGGTTCAAGAAAACCAGAAATTATTATCGGATTAATTGGCTCTATCATT
GGGATTCTAGTTGGCTTTTG

Product: YkrP protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYIYIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLIL
PYVFFQLIYSIFYYFLLSKDNLSIQFLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL
SRTLVFFPFFLVGYFLKKEHFYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLFIRALVYL
ISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQYSPSTFLLLFVVTFVLTVLLSSRLVKIFVQ
PVIELRVSMLRDVFSRLTKRESY

Sequences:

>Translated_343_residues
MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYIYIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLIL
PYVFFQLIYSIFYYFLLSKDNLSIQFLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL
SRTLVFFPFFLVGYFLKKEHFYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLFIRALVYL
ISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQYSPSTFLLLFVVTFVLTVLLSSRLVKIFVQ
PVIELRVSMLRDVFSRLTKRESY
>Mature_343_residues
MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYIYIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLIL
PYVFFQLIYSIFYYFLLSKDNLSIQFLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL
SRTLVFFPFFLVGYFLKKEHFYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLFIRALVYL
ISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQYSPSTFLLLFVVTFVLTVLLSSRLVKIFVQ
PVIELRVSMLRDVFSRLTKRESY

Specific function: Unknown

COG id: COG3594

COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 40558; Mature: 40558

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYIYIYTFHMPAFVLISGF
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKSFGKPGYLKKTMKKLILPYVFFQLIYSIFYYFLLSKDNLSIQFLDPEWSLWFLLSLF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
FWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSLSRTLVFFPFFLVGYFLKKEH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLFIRALVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
ISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQYSPSTFLLLF
HHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VVTFVLTVLLSSRLVKIFVQPVIELRVSMLRDVFSRLTKRESY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYIYIYTFHMPAFVLISGF
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKSFGKPGYLKKTMKKLILPYVFFQLIYSIFYYFLLSKDNLSIQFLDPEWSLWFLLSLF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
FWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSLSRTLVFFPFFLVGYFLKKEH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLFIRALVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
ISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQYSPSTFLLLF
HHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VVTFVLTVLLSSRLVKIFVQPVIELRVSMLRDVFSRLTKRESY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]