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The map label for this gene is 226223605

Identifier: 226223605

GI number: 226223605

Start: 1017994

End: 1018848

Strand: Direct

Name: 226223605

Synonym: Lm4b_01007

Alternate gene names: NA

Gene position: 1017994-1018848 (Clockwise)

Preceding gene: 226223604

Following gene: 226223606

Centisome position: 34.95

GC content: 36.02

Gene sequence:

>855_bases
ATGATTAGTCGTAATTTAAAAATTTATTTTCGTGATAGAACAGCTGTATTTATGTCATTACTAACTGTTTTAATTATTAT
TGGGCTGTATGCGATTTTTTTAGGAAATAATATGGAAGAGATGTTCAAACAGGCTTCTGGAAAAACGATAGGGATTCAAG
AATTAGTGAATACTTGGGTGATTGCGGGGATTTTATCCATTACACCTGTGACAGTATCGTTAGCTGTTTTTTCTTTGAAA
GTACATGATGAAGAATTAAGTATTGCGAGAAGCTTTGCGATAACACCAGCTTCCAGATGGCGTATTGTTATTAGTTATAT
TGTTAGTGGACTAGTTGCTTCCTTCTTGTTGTCTGTTGTAACACTTTTTGTTGGAGAAATGTATATTTGGTTGACTGGCG
GAGCATTTTTACCTTTTGAGAGCTGGATTCGTTTAATTGGGGTTATTTTAATTAATGTTCTCTGTTGTAGTAGTATGATG
TTTTTTATCGCCAGTTTGGTGAAAAAAGCGAGTGCCTTTAGCTCCGTTTCGACGATTGTTGGGACTGTTATTGGTTTTAT
TGCAGGGATTTATTTACCCATTGGTTCACTTCCGGCTACGGTGCAAACTGCGATGAAATGTTTTCCTTTCACATACGGAG
CTTCTACCATTCGAGAAATCATGACGAAAGAGCCATTACAACAAGTTTTTGCAGGTAATACTCAGGCGATGGATGCAACA
AAAGAAATGATTGGAATTACGATTTATTGGAGCGATAAAACAGTTACAACAGGGCTTAGTTTACTTATTTTAAGTGCCTT
TGCAGTCGTGTTTGGTGTATTATCTGTGATCCTCATGAAACGACAAACAAAATAA

Upstream 100 bases:

>100_bases
TTGGCTATTTTAAATCAGGCTATAGGATTTTACGACTCTTTTGAGGTGATTAAAGGGAACTTAGATGACGCTTTTATTTC
GATGATTAAGGAGGACTCCA

Downstream 100 bases:

>100_bases
TTTTTGAATAAAAAATCAGCCGAAATTCTCCTAGTTATGCTATACTAATGGAATGTGAATGAATCTAGGAGGAAAATAAC
AATGAGTCAAGATTTGCAAA

Product: CylB protein

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily; ABC Transporter; ABC Transporter Integral Membrane Protein; ABC-2 Type Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter-Like Protein CylB; ABC Transporter Membrane Protein; ABC Transporter Permease; Membrane Permease; ABC Tranporter Permease; Drug ABC Exporter Membrane-Spanning Subunit; Multidrug ABC Transporter Permease; CylB Protein; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Protein; CylB Protein; ABC Transporter Permease Component

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWVIAGILSITPVTVSLAVFSLK
VHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVVTLFVGEMYIWLTGGAFLPFESWIRLIGVILINVLCCSSMM
FFIASLVKKASAFSSVSTIVGTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK

Sequences:

>Translated_284_residues
MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWVIAGILSITPVTVSLAVFSLK
VHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVVTLFVGEMYIWLTGGAFLPFESWIRLIGVILINVLCCSSMM
FFIASLVKKASAFSSVSTIVGTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK
>Mature_284_residues
MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWVIAGILSITPVTVSLAVFSLK
VHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVVTLFVGEMYIWLTGGAFLPFESWIRLIGVILINVLCCSSMM
FFIASLVKKASAFSSVSTIVGTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31109; Mature: 31109

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWV
CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECHHHHHHHHH
IAGILSITPVTVSLAVFSLKVHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVV
HHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLFVGEMYIWLTGGAFLPFESWIRLIGVILINVLCCSSMMFFIASLVKKASAFSSVSTIV
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK
HHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWV
CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECHHHHHHHHH
IAGILSITPVTVSLAVFSLKVHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVV
HHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLFVGEMYIWLTGGAFLPFESWIRLIGVILINVLCCSSMMFFIASLVKKASAFSSVSTIV
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK
HHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA