| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223569
Identifier: 226223569
GI number: 226223569
Start: 986796
End: 987617
Strand: Reverse
Name: 226223569
Synonym: Lm4b_00971
Alternate gene names: NA
Gene position: 987617-986796 (Counterclockwise)
Preceding gene: 226223582
Following gene: 226223568
Centisome position: 33.91
GC content: 35.4
Gene sequence:
>822_bases ATGCTAAAGCGCGTGTTCTTCTCCATTATCTTACCATTAGGTTGTTTAGTTGGAGCAATTTTTATTTTACTGACGATTAA CACGACTTATCCAAAAGCAGCCAATGAATCCATCCCTACCATTTTTATACATGGTTATCGTGGGACAGACCGCTCGCTTC ACGGAATGATACGTCGCTTTGACCAAAAGTATGATTGGGGTACAGAGTCATTGACCGTAAATGTAAGCCCAGATGGAAAA ATTTCTACTACTGGAACTTATAACAAAAAAGAAAAAAATCCACTTATCAACATTGTTTTTGAAGATAATCGAGCAACGCT TCCTCAACAATCAATGTGGACAAAAAAGGTAATGTCTTATTTACAACAAAATTATGCCATAAAAAAATTTAATGCAGTAG GTCATTCAATGGGTGGCGGTGCTTGGGTTTCTTATTTAGCTAGTTACGAGAAAAACAAGTCCTATCCACAAGTAAATAAA ATTGTGTTTCTTGCAGTTCCATTTTATCCGGAAGAATATGTGAATGGCGATCAGCAGGTTGATATTAAAAATGCCAATAA TGTGCATGCTAAATTCGCTGAGAAAATGGCCAAAGTTTTACCCAACAATACTGAAATTATGATTATTGGTGGTAATTTGG AAGATGGTTCAAATAGTGATGGTGAAGTGAAATTAGATAGTGTTTTATATGGTGAAAAATTATTTGCACATCAAAAGGTA ACGACACATGTCATTAAAGGACCACAAGCTACTCATAGTAGTATGCATGAATCTACTGTAGTGGATAAGTATGTTGGTCA ATTTTTATGGGGCGAGAAATAA
Upstream 100 bases:
>100_bases AAGAAACCATTAAATTAGTAGAAAAAGTAGACCAATCGTGCGTTTTCTATAAAAAAAATGTATAATTTGTTCATAACGAA TTTTAAAGGGGCGTAAAATA
Downstream 100 bases:
>100_bases ACGATTAAAGGATGTTTGAAATGAAAAAAGTTATTAGTTTAATTATCGCATTAGCCATTATCATTACTGGCTTTTGGATA ATTTTTCTTCAATTTGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Surface Hydrolase; Cell Surface Hydrolase Membrane-Bound; Lipoprotein; Lipase/Esterase; Alpha/Beta Hydrolase; Extracellular Lipase/Esterase; Cell Surface Hydrolas; Secreted Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIHGYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGK ISTTGTYNKKEKNPLINIVFEDNRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKV TTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK
Sequences:
>Translated_273_residues MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIHGYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGK ISTTGTYNKKEKNPLINIVFEDNRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKV TTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK >Mature_273_residues MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIHGYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGK ISTTGTYNKKEKNPLINIVFEDNRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKV TTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30664; Mature: 30664
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIHGYRGTDRSLHGMIRRF CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH DQKYDWGTESLTVNVSPDGKISTTGTYNKKEKNPLINIVFEDNRATLPQQSMWTKKVMSY HHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH LQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNKIVFLAVPFYPEEYVNGDQQV HHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHCCCCCEE DIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKV EECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIHGYRGTDRSLHGMIRRF CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH DQKYDWGTESLTVNVSPDGKISTTGTYNKKEKNPLINIVFEDNRATLPQQSMWTKKVMSY HHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH LQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNKIVFLAVPFYPEEYVNGDQQV HHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHCCCCCEE DIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKV EECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA