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The map label for this gene is yueF [H]

Identifier: 226223528

GI number: 226223528

Start: 945362

End: 946498

Strand: Reverse

Name: yueF [H]

Synonym: Lm4b_00928

Alternate gene names: 226223528

Gene position: 946498-945362 (Counterclockwise)

Preceding gene: 226223546

Following gene: 226223500

Centisome position: 32.5

GC content: 35.62

Gene sequence:

>1137_bases
TTGAAATTTTCACGATTTCGAGATAGTAAATTATTTTTTTGGACAATTGAAATTTTAGCGGTTGTAGCTATTTTGTTCGT
TCTATTGCAAATGAAGTACATATTTTCACCAATCGGCATCATAGTTTCTACATTGTTTATGCCGATTTTGGTCGCAGGGT
TCCTATTCTATTTATTTAACCCGCTCGTATTATTTTTAGAAAAAAGAAAAGTACCTCGACTTTTGAGTGTTATTTTAATT
TTTATTGCCTTTATCACGCTTGTTGTTCTTGCAGTAATGCAACTCGGTCCAACGCTTGCTGACCAAGTAGCTGAACTCGC
AAAAGCAATACCAGGTTACTGGCAAGATTTTGAAAAATGGCTGCAAGATCTCTCGAATAATTCTGCACTAAAAGATTTAG
ACATAAAACAAGAACTTGAGAAGCTCAACATTTCCTTACCAAAAATCATGTCTGTGGTCGTTGACGGGGTAGCTTCTAGT
TTTGGAGCCATTGTCTCCTTTGTCTCTAGTTTTGTTATGATTCTTGTAACTGTACCATTTATCGTCTTTTATATGTTTAA
AGATGGTCATAAGTTCGTTGAGTCCTCTGGAAGATTTTTCCCGGCAGGTATTCGTTCTGAAGCAAAACAAATTATTAAAG
AAATGAATAAAACCATTTCTACTTATATTAGTTCACAAGCGATTGATTGTATGTTTGTTGGTTTATTTACTTTCATTGGT
TATTTAATTATTGGTCAACCGTATGCGCTTCTGTTTGGTTTTATTGCAGGTGCAACGAATATTATTCCTTATCTTGGACC
ATTCATTGGAGCAGCTCCCGCAGTTATCGTGGCGCTATTTACTTCTCCAGTCCAAGCACTGCTCGTTATTGTTGTCGTAA
CGATTGTGCAACAAATTGACTCTAACTTACTTTCTCCATATATTATGGGTAAATCACTATCGATTCACCCACTAACTATT
ATCATTATCTTGATTGTTGCTGGAAACTTAGCAGGAATCTTTGGAATGATTTTAGGTGTTCCACTTTATGCGGTTGTGAA
AACAATTATTGTGAATGTTAATCGTTTAATTAAATTGCGGCGAGGTCAGCTGGCGATTGATAATAATCTTCCTGATCCGG
ATACACCGAAAGAATAA

Upstream 100 bases:

>100_bases
ACATATACTTATGCGTCAATAGCAGTAATTCAGTGGCTATTTAAAGCAGTTAATGGTACTATAAAATTTATCAATAAGGT
TTTAGAAAGAAGGGGAGAAT

Downstream 100 bases:

>100_bases
AAAAACGAGCTTTGGGAAACTAGTTCCTAAAGCTCGTTTTTTCTATGCTTTTTTAAAATGGGAAGTGTCATTTAAACGTT
CTAATTTGAATAAGCCGTTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVILI
FIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQDLSNNSALKDLDIKQELEKLNISLPKIMSVVVDGVASS
FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIG
YLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTI
IIILIVAGNLAGIFGMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPDPDTPKE

Sequences:

>Translated_378_residues
MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVILI
FIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQDLSNNSALKDLDIKQELEKLNISLPKIMSVVVDGVASS
FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIG
YLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTI
IIILIVAGNLAGIFGMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPDPDTPKE
>Mature_378_residues
MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVILI
FIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQDLSNNSALKDLDIKQELEKLNISLPKIMSVVVDGVASS
FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIG
YLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTI
IIILIVAGNLAGIFGMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPDPDTPKE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=312, Percent_Identity=28.8461538461538, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082271, Length=305, Percent_Identity=23.9344262295082, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787885, Length=313, Percent_Identity=24.9201277955272, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41836; Mature: 41836

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEECCCCCCCCCCCC
>Mature Secondary Structure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CCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]