Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223395
Identifier: 226223395
GI number: 226223395
Start: 802186
End: 802569
Strand: Direct
Name: 226223395
Synonym: Lm4b_00793
Alternate gene names: NA
Gene position: 802186-802569 (Clockwise)
Preceding gene: 226223393
Following gene: 226223396
Centisome position: 27.54
GC content: 38.54
Gene sequence:
>384_bases GTGGAGATAAAGGTTCAAAAGAAATTGACTGACGGCAGAATCGCTTTTAGTAGTGAATATGGTGAATGCGTTGGTATATG GGCCGATGAAGACCCAGAACCAAGTAGGGTTTACACAGTAGAAATTACAATACCGGACATGATTAGCGCAGAACTGCTAC ACGAGAGTGAAGAGAAACATTGTGCATTAGAAATAGACGAAGAAGGCTTAGTTCACGTAATTGGGAAGTTAGAGGATTAC GAGGAAGATGGCTTTGCAGTGCTCCGCTTAGAAGAAAGTATTATTTGTTTTGACACGAAATTCAGTGAAGAAATCGAAAT GCTCCATGGAAGATTTGTTGAATTTGTTATTCCGGAAATAAAATTAAGTAATGTTGGTATATAG
Upstream 100 bases:
>100_bases ATGACAAATAAAAAGTGAAAATACTTTGCTAAAAATTAACGTCCTTTTCTATTTTGTGCTATAATAAAGCAAGAATTTGA AGCGCAGGAGGAAATGGTTA
Downstream 100 bases:
>100_bases ATTGAAATGAAAGAGGCAGGAAACAGATAGTGAGAGTTTCCTGTCTTTTTTTTGTTATTTGGAAGGAGTGCTTGAATAAT TATTCATTCGTGAATTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITIPDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDY EEDGFAVLRLEESIICFDTKFSEEIEMLHGRFVEFVIPEIKLSNVGI
Sequences:
>Translated_127_residues MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITIPDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDY EEDGFAVLRLEESIICFDTKFSEEIEMLHGRFVEFVIPEIKLSNVGI >Mature_127_residues MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITIPDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDY EEDGFAVLRLEESIICFDTKFSEEIEMLHGRFVEFVIPEIKLSNVGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14492; Mature: 14492
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITIPDMISAELLHESEEKH CCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCE CALEIDEEGLVHVIGKLEDYEEDGFAVLRLEESIICFDTKFSEEIEMLHGRFVEFVIPEI EEEEECCCCEEEEEECCCCCCCCCEEEEEEECEEEEEECCCHHHHHHHHHHEEEEEECCE KLSNVGI EECCCCC >Mature Secondary Structure MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITIPDMISAELLHESEEKH CCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCE CALEIDEEGLVHVIGKLEDYEEDGFAVLRLEESIICFDTKFSEEIEMLHGRFVEFVIPEI EEEEECCCCEEEEEECCCCCCCCCEEEEEEECEEEEEECCCHHHHHHHHHHEEEEEECCE KLSNVGI EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA