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The map label for this gene is ypmR [H]

Identifier: 226223373

GI number: 226223373

Start: 780929

End: 781750

Strand: Direct

Name: ypmR [H]

Synonym: Lm4b_00771

Alternate gene names: 226223373

Gene position: 780929-781750 (Clockwise)

Preceding gene: 226223372

Following gene: 226223374

Centisome position: 26.81

GC content: 39.42

Gene sequence:

>822_bases
GTGAAAAAGAGTAAGACGGTTCAAATTCTATTAGTTTTTTCCGTTGTTGCGTTAATTTTGAGCATGGTTGGGGTGGTATC
AATTTGGTATGGGCAGAAAAATCATCAAACGAATAATGCGAAAACCACCGCCAAAAAAGAGACGACAGTAACGAAAAAAC
AAGATACCTTTAAAATAACCGCGCTCGGTGACTCACTTACATATGGCGTTGGCGATACAGAAGGCGGCGGGTATGTCCGA
GTGGTGGAGAATTTCTACAAACAAAAAGAGAAAAATGTCGAGAATGTCAATCTTGCTATTAGTGGGGCGAAATCAGACCA
GCTTCTCAAACAATTAGATCAAAAAGAAGTGCAAAACCAAATAAAATCAGCCGATGTTATTTTAATGACGATTGGCGGAA
ATGATTTGTTTCGTGGCGGAGAAGCACTGGATGATTTCAAAAGCAATGCAATTAAACAAGCCGAAGCAAGCTATACGAAC
AACCTGAAACAAATTTACCAAACGATACGAAAATTAAATCCATCCGCGCCCGTTTTTCATATTGGGCTGTATAATCCGTT
TATGTCATTAAAAAATGCGAGTGAAATGTCGGCAGTTGCGAATGAGTGGAACATGCAAAGTCAAAATCTATCGCAAAACG
AGAAAAATATCATTTATGTTCCGACTTTTGATTTATTTCAGCAAAATGGGGATGCATATTTAGCGACTGATAAATTCCAT
CCAAATCACGCCGGATATCAGTTTATCGGTAATCGGGTGACAGAGGTTATACAAACGGGAGGGGGAAAAGACGATGACGG
AGCTAGCACTTCAAGTAACTAA

Upstream 100 bases:

>100_bases
CTAGTTTTTACTAGCTATCCTTTTTAAATGAAGGAGTCTCATTTTAAAATATGCTATACTTAGTGAAATATAAACCTCAT
GAAACGGTAGGTGGTTGTCA

Downstream 100 bases:

>100_bases
TCTGCATAAAAAAATTCGCAAACGAGAAATTATCAAAGGGATTTCTTTTGAAGTAATGCCCGGAGAAGTTTTTGGCTTTC
TTGGACCGAATGGAGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTAKKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVR
VVENFYKQKEKNVENVNLAISGAKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTN
NLKQIYQTIRKLNPSAPVFHIGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNIIYVPTFDLFQQNGDAYLATDKFH
PNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN

Sequences:

>Translated_273_residues
MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTAKKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVR
VVENFYKQKEKNVENVNLAISGAKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTN
NLKQIYQTIRKLNPSAPVFHIGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNIIYVPTFDLFQQNGDAYLATDKFH
PNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN
>Mature_273_residues
MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTAKKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVR
VVENFYKQKEKNVENVNLAISGAKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTN
NLKQIYQTIRKLNPSAPVFHIGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNIIYVPTFDLFQQNGDAYLATDKFH
PNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 30148; Mature: 30148

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTAKKETTVTKKQDTFKIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCEEEE
ALGDSLTYGVGDTEGGGYVRVVENFYKQKEKNVENVNLAISGAKSDQLLKQLDQKEVQNQ
EECCCEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
IKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTNNLKQIYQTIRKLNPSAPVFH
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNIIYVPTFDLFQQNGDAYLATDKFH
EECCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEECCCC
PNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTAKKETTVTKKQDTFKIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCEEEE
ALGDSLTYGVGDTEGGGYVRVVENFYKQKEKNVENVNLAISGAKSDQLLKQLDQKEVQNQ
EECCCEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
IKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTNNLKQIYQTIRKLNPSAPVFH
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNIIYVPTFDLFQQNGDAYLATDKFH
EECCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEECCCC
PNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]