| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is inlJ [H]
Identifier: 226223362
GI number: 226223362
Start: 770032
End: 771936
Strand: Direct
Name: inlJ [H]
Synonym: Lm4b_00759
Alternate gene names: 226223362
Gene position: 770032-771936 (Clockwise)
Preceding gene: 226223361
Following gene: 226223363
Centisome position: 26.44
GC content: 37.22
Gene sequence:
>1905_bases ATGAAAAAAGCGTTTCTATGCCTATCCGCTGTTGTTTTGTCATTAAATTTTATGTGGGTTAACCCACTTTCTGGGTTGGC ATCCAAAATCGAAACAACAAAATTGAAATCAACAATGGATACAAACCAACAAGTTAATTTGAAAAATAATGCAACCGATA TTGTTACTTCGGAAGATTTAGGAGGGCAGACGTGGTTGATTAATGAAGTAAACAGACAATTAGCGCCTAAAAAGGTCGGT GTGGATTTAACATTTGACGATTTGGCTAAAATTAAGATCATTTCATTGAGTAATAAATCGCTTACTGGTGAAGTACCACC GGAGATTAAAAATTTAGTATCTCTTGAAAAATTGCTTTTATATTCTAATAAGCTATCAGGAGAGATTCCTGCTGAATTAG GGGAATTAACGAATTTATCAGAACTTCGATTAGACTACAATCAATTCACTGGAAAAATTCCTGATGGACTTGGAAAGATT TCGTCAATTGCGTTACAGAACAACGAACTGGTTGGCCAAATTCCTTTGAGCTTATACGAAAATCGAACAGGAACAAATGA AGTAAATGTATCAGGTAACCAAGTGACCATTAATAGTAGAGAGCCGGAACCAAGTATTTACTCCTACTCAACTTTTATTT ATCCAGCGACTACACCTCAATATAGTGGGCATTTGACGGCAACAACCACTTATTTTAGCAACGTAACGAATGATACATTG CTTACTCCTTTTCTTTCTGGCAGTTCTACTTTTATTGATTTGCATGCGGAGTTTATGTTAGATAGGGAACTTTTTGAAGG TCATGAGGTAACAATTACAGATGAGTCTTCTGGTAAAATACTTTACGAAGGTGAGTTAAATTCTGACATTAGTATTTCTT TGAAAAGTTTCAGCTCAGGCTATCATAATATTCGAGTTGTACTTGATAATGCGCCGAACAACCCACAAAACCAAGTAACT TTTGGTATCAGCATGGCAAGTACGGTGGCTGGTGATTTGACAGTTAACTATGTAGATGAAGATGGAAAAACGATTCATGA TCCACAGATAGTTAGTGGATTTGTAGGTGATGATTATGATGTAACAACGCCTGACTACGAATTAGTAATTGATGGGTACG AATTAGATACTTCCAAATTACCAACCAATGGGATGGGCACTTTTGACTACGCGCCACTATCTGTCACGTATGTCTATAAA AAAATGGAAGGCGCACCTGTCACAGTAAAATACGTAGATGAAAACGGCAACGAAATCACTACTTCTGACACTTTGACCGG AAAACTAGATGATTCTTATCACGCAAAAGCGAAAGAAATTACTGGATTTACATTAGATAATAGTAAACTACCAGCCAATG CAAGCGGCGTTTTTGAAACAAATCCACAAACAGTCACCTACGTGTATAATGCAGTACCTGCAAAAATTAAAGCGCATGAT TCCACGATTTACGTAGGAGATACATGGAGCGCAGAGGATAATTTTGATAGCGCAGTAAATTCTGTTGGAGCTGCAGTTTC CTTTGATGATGTAAAAGTAGAAGGGAAAGTAGACACGACAAAAGCAGGTGTTTATCCGGTTACTTATAGTTTTTCCGGGG AAGCTGTGACTATTAATGTAACTGTAAAAGCTAAAGTTATTCCAGCACCACCAGTAACACCTGTTCAACCAATTAATCCA GACCAACCAAACATTCCAAATACACCTAGCGTAGATCAGACTCACGTTGCAAAACCTGGAAATTTAAAGGTAACAAAGAC ACAACCTACAGTAGCAGGAAAAATAAAACTACCAACTACAGGGGATAATCTTTGGGATAGTGTGCTGTATAGTGTATTTG GTTTAATAGCAGTATGTGTCGCATTTAGTTTATTCTTCTGGCGTAAAAAGCAAAAGCATAGCTGA
Upstream 100 bases:
>100_bases GTTCATAAATAGGAAATTTTGCTACTTAGGAAGGCGTTTTTGAGTGGCTGTTTAGCGTATAATTTTAGGAGTAATAAATA TTACTGGAGGTTATACACGA
Downstream 100 bases:
>100_bases AATATATTAGAACTAGGCTGCCTATTTTAAAAGGGTAATGTGCTAAAGAGATACCAACTAAAAACGGTATACCAGCAAAA AATAACTTTACGTCCTATTC
Product: peptidoglycan bound protein (LPXTG motif)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MKKAFLCLSAVVLSLNFMWVNPLSGLASKIETTKLKSTMDTNQQVNLKNNATDIVTSEDLGGQTWLINEVNRQLAPKKVG VDLTFDDLAKIKIISLSNKSLTGEVPPEIKNLVSLEKLLLYSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKI SSIALQNNELVGQIPLSLYENRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATTPQYSGHLTATTTYFSNVTNDTL LTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDESSGKILYEGELNSDISISLKSFSSGYHNIRVVLDNAPNNPQNQVT FGISMASTVAGDLTVNYVDEDGKTIHDPQIVSGFVGDDYDVTTPDYELVIDGYELDTSKLPTNGMGTFDYAPLSVTYVYK KMEGAPVTVKYVDENGNEITTSDTLTGKLDDSYHAKAKEITGFTLDNSKLPANASGVFETNPQTVTYVYNAVPAKIKAHD STIYVGDTWSAEDNFDSAVNSVGAAVSFDDVKVEGKVDTTKAGVYPVTYSFSGEAVTINVTVKAKVIPAPPVTPVQPINP DQPNIPNTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS
Sequences:
>Translated_634_residues MKKAFLCLSAVVLSLNFMWVNPLSGLASKIETTKLKSTMDTNQQVNLKNNATDIVTSEDLGGQTWLINEVNRQLAPKKVG VDLTFDDLAKIKIISLSNKSLTGEVPPEIKNLVSLEKLLLYSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKI SSIALQNNELVGQIPLSLYENRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATTPQYSGHLTATTTYFSNVTNDTL LTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDESSGKILYEGELNSDISISLKSFSSGYHNIRVVLDNAPNNPQNQVT FGISMASTVAGDLTVNYVDEDGKTIHDPQIVSGFVGDDYDVTTPDYELVIDGYELDTSKLPTNGMGTFDYAPLSVTYVYK KMEGAPVTVKYVDENGNEITTSDTLTGKLDDSYHAKAKEITGFTLDNSKLPANASGVFETNPQTVTYVYNAVPAKIKAHD STIYVGDTWSAEDNFDSAVNSVGAAVSFDDVKVEGKVDTTKAGVYPVTYSFSGEAVTINVTVKAKVIPAPPVTPVQPINP DQPNIPNTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS >Mature_634_residues MKKAFLCLSAVVLSLNFMWVNPLSGLASKIETTKLKSTMDTNQQVNLKNNATDIVTSEDLGGQTWLINEVNRQLAPKKVG VDLTFDDLAKIKIISLSNKSLTGEVPPEIKNLVSLEKLLLYSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKI SSIALQNNELVGQIPLSLYENRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATTPQYSGHLTATTTYFSNVTNDTL LTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDESSGKILYEGELNSDISISLKSFSSGYHNIRVVLDNAPNNPQNQVT FGISMASTVAGDLTVNYVDEDGKTIHDPQIVSGFVGDDYDVTTPDYELVIDGYELDTSKLPTNGMGTFDYAPLSVTYVYK KMEGAPVTVKYVDENGNEITTSDTLTGKLDDSYHAKAKEITGFTLDNSKLPANASGVFETNPQTVTYVYNAVPAKIKAHD STIYVGDTWSAEDNFDSAVNSVGAAVSFDDVKVEGKVDTTKAGVYPVTYSFSGEAVTINVTVKAKVIPAPPVTPVQPINP DQPNIPNTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 69000; Mature: 69000
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFLCLSAVVLSLNFMWVNPLSGLASKIETTKLKSTMDTNQQVNLKNNATDIVTSEDL CCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC GGQTWLINEVNRQLAPKKVGVDLTFDDLAKIKIISLSNKSLTGEVPPEIKNLVSLEKLLL CCCEEEEEHHHHHCCCHHCCCEEEHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH YSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKISSIALQNNELVGQIPLSLYE HHCCCCCCCCHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCEEEEEECCCEEEEECHHHHC NRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATTPQYSGHLTATTTYFSNVTNDTL CCCCCCEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCEE LTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDESSGKILYEGELNSDISISLKSFSSG EEEEECCCCEEEEEEEHHEEEHHHHCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCC YHNIRVVLDNAPNNPQNQVTFGISMASTVAGDLTVNYVDEDGKTIHDPQIVSGFVGDDYD CCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEECCCCCEECCCHHEECCCCCCCC VTTPDYELVIDGYELDTSKLPTNGMGTFDYAPLSVTYVYKKMEGAPVTVKYVDENGNEIT CCCCCEEEEEECEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEE TSDTLTGKLDDSYHAKAKEITGFTLDNSKLPANASGVFETNPQTVTYVYNAVPAKIKAHD ECCEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEECC STIYVGDTWSAEDNFDSAVNSVGAAVSFDDVKVEGKVDTTKAGVYPVTYSFSGEAVTINV CEEEEECCCCCCCCHHHHHHHHCCEEEECCEEEECEECCCCCCEEEEEEECCCCEEEEEE TVKAKVIPAPPVTPVQPINPDQPNIPNTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTT EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC GDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKAFLCLSAVVLSLNFMWVNPLSGLASKIETTKLKSTMDTNQQVNLKNNATDIVTSEDL CCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC GGQTWLINEVNRQLAPKKVGVDLTFDDLAKIKIISLSNKSLTGEVPPEIKNLVSLEKLLL CCCEEEEEHHHHHCCCHHCCCEEEHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH YSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKISSIALQNNELVGQIPLSLYE HHCCCCCCCCHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCEEEEEECCCEEEEECHHHHC NRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATTPQYSGHLTATTTYFSNVTNDTL CCCCCCEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCEE LTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDESSGKILYEGELNSDISISLKSFSSG EEEEECCCCEEEEEEEHHEEEHHHHCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCC YHNIRVVLDNAPNNPQNQVTFGISMASTVAGDLTVNYVDEDGKTIHDPQIVSGFVGDDYD CCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEECCCCCEECCCHHEECCCCCCCC VTTPDYELVIDGYELDTSKLPTNGMGTFDYAPLSVTYVYKKMEGAPVTVKYVDENGNEIT CCCCCEEEEEECEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEE TSDTLTGKLDDSYHAKAKEITGFTLDNSKLPANASGVFETNPQTVTYVYNAVPAKIKAHD ECCEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEECC STIYVGDTWSAEDNFDSAVNSVGAAVSFDDVKVEGKVDTTKAGVYPVTYSFSGEAVTINV CEEEEECCCCCCCCHHHHHHHHCCEEEECCEEEECEECCCCCCEEEEEEECCCCEEEEEE TVKAKVIPAPPVTPVQPINPDQPNIPNTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTT EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC GDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA