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The map label for this gene is flgC

Identifier: 226223342

GI number: 226223342

Start: 751475

End: 751885

Strand: Direct

Name: flgC

Synonym: Lm4b_00739

Alternate gene names: 226223342

Gene position: 751475-751885 (Clockwise)

Preceding gene: 226223341

Following gene: 226223343

Centisome position: 25.8

GC content: 41.85

Gene sequence:

>411_bases
ATGTTTGAAGGAATAAACACAAGTGGCTCCGCGTTAAATGCTGCGAAACAATGGATGGAAGTAAGCTCCAATAATATCGC
GAACGCCGATTCAAGCGCCGCACCTGGCGAGACACCTTTCCTTAGAAAACGCGTCGTATTATCCGAAATCACACCATTTG
AAACAGCTCTAACTGGAACAAAAGGTGTTAAAGTAAGCGAAATATCGAGCGACACAGGAAGCGTCAAACGTGTCTATGAT
CCAACTCATCCTAACGCAAATGAAGCGGGTTACGTCAATTACGCGAATGTTGATATGACAGCAGAAATGACCAATTTAAT
GGTCGGACAAAAAATGTACGCGGCAAACACTTCCGCCTTACAAGCAAATGAAAAAATGATGGAAAAAGATTTAGAAATTG
GCAAAGTATAA

Upstream 100 bases:

>100_bases
GCTTAACAAAAAATAACCAAATGTACGCGCTCGCTATCAGTGCACTCAACTATAATTCATCCATCAACACAGCAGCCCGT
GGAAAGTAAGGTGATAAACC

Downstream 100 bases:

>100_bases
AGGAGTGTTTTAAGAAATGGCAATTGAAAGTATTAATGCAGCAAGTGTCTTACCTAAAGTAACGCTTGGTGAAACCGCGA
AAACAGACAATGCGACAGGT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV

Sequences:

>Translated_136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV
>Mature_136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=131, Percent_Identity=38.1679389312977, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14599; Mature: 14599

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
KGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSAL
CCCEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCHHH
QANEKMMEKDLEIGKV
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
KGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSAL
CCCEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCHHH
QANEKMMEKDLEIGKV
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]