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The map label for this gene is fliD

Identifier: 226223338

GI number: 226223338

Start: 749094

End: 750383

Strand: Direct

Name: fliD

Synonym: Lm4b_00735

Alternate gene names: 226223338

Gene position: 749094-750383 (Clockwise)

Preceding gene: 226223337

Following gene: 226223339

Centisome position: 25.72

GC content: 40.54

Gene sequence:

>1290_bases
GTGGGAAGTTCGATTGCAAGCAGTTTAATGGACCCAACGCAATACTATTCGCAATTTATCAGTCTTCAAAAAGCTAGTTT
GGAAAAAGCGAAAACGCCTTATCAAAACCAAATTTCCAGCTACCAATCACGGATTGATCTTTATGCTAGTTTGAAAAATG
CTTTATCTGAGTCGCTGAAAACGATGAGCTCTTTCACGACTTATGAAAGTAAAACCAAACTTGCGACTTCATCCAACGAA
ACGAGTTTTACTGTTTCATCAACGAGCAGTTCCGTCAACGGCAGTTATTCTATCGAAGTCCAAAACTTGGCGACTGCAGA
CACATACAACAAAGCAGTACCTGATATTGAGGCAAAAATCGGTGTAAGCGGGACAATCAAAATCAATGGCAAAGAAATTA
AAGTTGATGCAGATAGCTCAATGAAAAATGTGATGAACTCCATCAATAGCGCTGGAGCTAAGGTGAATATCTACACGCTA
GGCGAAAACATGGTCGTAACTTCTTCAACAACCGGTGTCGAAAACAGTATTAAATTTGAAGGCGATTCGGCTGTTCTCGA
TGCACTTGGTTTAGTACAAAATTCCCCAGACCATTTAGCTGCAGAGGACGCCAAACTCAGAATCAACGGAGCGACCGTTA
CAAGTGCAACAAACAAGGTAACCAACTACATCCCAGGCGTGACCATCAACCTCAAAAAAGAAACAACTGGCGCTGAAAAA
TTAACCATCCAAGACCAAAGCGATGAAAAAGCAGCCAGCATGATCACCAGTTTTGTAAATACATACAATGCACTAACAAG
CACAATGAAAACCTACACGGGAAAAGGAACCATTTTACAAGCATCTGCTGCCGACCTCGAAGCAAATCGCGCCCTAAACA
ACGTATTCCAACATAAAAAAGATGGGAATACATTATTCGATTTTGGAATAAGTGTCGATAAAGAAGGCGTTTTAAAAGTC
GATGAAACTGCAATGAAAAAAATGGTAGCTGAAGACCCAACCGCCGTCGAAAGATTTTTCTTTGGCATTGGCGGAATTGG
CGATGAACTGTATCAATCTTTGAACAAAACATTTGGCTCGACAGGCTTTATCAGTGATGAAACGACCTCGATGACGAATG
AAATCAATAAATTAAACCTCAAGTTAACCGATATTACTAGCCGAAATGACACGTTATTAACGAATATTACGGATCAATAC
AACAAATGGCTTGAAATGATGCAAGCTATGCAAAGCGACGCCATGACGCTAGACGCCCTCATCGATGGCATGAACAGTTC
TAATAAATAA

Upstream 100 bases:

>100_bases
GTAATCTAAATAAAACATCGATTGCATACCAAGCCGCACTACAATCCAGTGTGATGGTACAAAAATTAAGCATTCTAAAT
TATATGTGAGGTGAGACCAA

Downstream 100 bases:

>100_bases
AAATGGTAGGTGAAAAAAATGCAAGCTTGGAAACGATACACGCAAAATGAATTAAATACGAGCAATCCCATTAAAAACAC
CATTTATATATACGAACGTT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLKTMSSFTTYESKTKLATSSNE
TSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTL
GENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKV
DETAMKKMVAEDPTAVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQY
NKWLEMMQAMQSDAMTLDALIDGMNSSNK

Sequences:

>Translated_429_residues
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLKTMSSFTTYESKTKLATSSNE
TSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTL
GENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKV
DETAMKKMVAEDPTAVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQY
NKWLEMMQAMQSDAMTLDALIDGMNSSNK
>Mature_428_residues
GSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLKTMSSFTTYESKTKLATSSNET
SFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTLG
ENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEKL
TIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKVD
ETAMKKMVAEDPTAVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYN
KWLEMMQAMQSDAMTLDALIDGMNSSNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=455, Percent_Identity=26.1538461538462, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46350; Mature: 46219

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLK
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKI
HHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHCCCCCCCEEC
GVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTLGENMVVTSSTTGVENSIKFE
CCEEEEEECCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCEEEC
GDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECHHHHHHHHCCCCEEEEECCCCCCEE
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKK
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
DGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPTAVERFFFGIGGIGDELYQSLNKTFGS
CCCEEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
TGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDAL
CCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEHHHH
IDGMNSSNK
HHCCCCCCC
>Mature Secondary Structure 
GSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLK
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKI
HHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHCCCCCCCEEC
GVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTLGENMVVTSSTTGVENSIKFE
CCEEEEEECCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCEEEC
GDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECHHHHHHHHCCCCEEEEECCCCCCEE
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKK
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
DGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPTAVERFFFGIGGIGDELYQSLNKTFGS
CCCEEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
TGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDAL
CCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEHHHH
IDGMNSSNK
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]