| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yhaI [H]
Identifier: 226223303
GI number: 226223303
Start: 717617
End: 718045
Strand: Direct
Name: yhaI [H]
Synonym: Lm4b_00700
Alternate gene names: 226223303
Gene position: 717617-718045 (Clockwise)
Preceding gene: 226223301
Following gene: 226223306
Centisome position: 24.64
GC content: 37.06
Gene sequence:
>429_bases ATGGGATTTTTAGAAGCTTACAAATCATTTTGGAGAAATTACGTTAACTTTAGTGGCAGAGCCCCGAGATCGGCGTATTG GTATGTAGTACTTTGGAATGTTATTATTTTTGTAATACTTTATGCTTTAGCTTTTATTTTTGGTATTTCAGCTATTATGG AAGCAGCTATGGGTGGTACGGGAATGGCTGGCGGTGGCGGTGCAATCGTTCTGGTAATCATTTTATGGCTATACTTGCTA GCGGCTTTACTTCCAACAATCAGCTTAATGGTTCGACGCTTACATGATTCTGGCAAAAGTGGATTTTTCGTCCTTTTAAG CCTTATTCCATTTGCTGGCGGAATTATTATGTTAATTTTTATGTGTCTTGAAAGTGATGGACCAAACCAATATGGTGATG GGGATATAGATAGTAAATTTGATTTTTAA
Upstream 100 bases:
>100_bases ATGTGTCTATTTTATGAATCTTTATTGTAAGAGCTTGTGTAATGGGATGGCTACATATATCCTTATAGATACGGTGAAAT TTATTTACATAGGAGGAAAT
Downstream 100 bases:
>100_bases ATAGAAAACGAGCTAGGAGATAATCCTAGCTCGTTTTTTTAATGGATTCCTTCGCTTACAAGGAACCAATTCACTTGGTT GGTATTAATAAAATACGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALAFIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLL AALLPTISLMVRRLHDSGKSGFFVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF
Sequences:
>Translated_142_residues MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALAFIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLL AALLPTISLMVRRLHDSGKSGFFVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF >Mature_141_residues GFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALAFIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLLA ALLPTISLMVRRLHDSGKSGFFVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=138, Percent_Identity=36.9565217391304, Blast_Score=85, Evalue=2e-18, Organism=Escherichia coli, GI2367196, Length=131, Percent_Identity=34.3511450381679, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 15640; Mature: 15509
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALAFIFGISAIMEAAMGGT CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GMAGGGGAIVLVIILWLYLLAALLPTISLMVRRLHDSGKSGFFVLLSLIPFAGGIIMLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MCLESDGPNQYGDGDIDSKFDF HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALAFIFGISAIMEAAMGGT CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GMAGGGGAIVLVIILWLYLLAALLPTISLMVRRLHDSGKSGFFVLLSLIPFAGGIIMLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MCLESDGPNQYGDGDIDSKFDF HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]