| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223284
Identifier: 226223284
GI number: 226223284
Start: 700589
End: 701581
Strand: Direct
Name: 226223284
Synonym: Lm4b_00681
Alternate gene names: NA
Gene position: 700589-701581 (Clockwise)
Preceding gene: 226223283
Following gene: 226223285
Centisome position: 24.05
GC content: 25.38
Gene sequence:
>993_bases ATGAGAGCAGACTTATCAATTATGTGGGTTGAAGATACAACTTCATGGTATACAGAACAAAAAGATCTTCTAAATATGGA CATAGAAAGCTTGGGTATAGATATTGAATTTACTCGTATTTCTACAATTGATGATTTTTATAAATTGGTTAGGAATGATA ATACAGGTTTTAGTAAATATGATATTTTTTTTGTTGATTATGCATTATCCTCTGATACTGAACAAAAAGGAAGTAACATA ATTGTTAAGTTAAAAGATATGGGCTTAACAACAGATATTCTTTTCTATTCTTCAAAAAATATAAGAGAAATAAGGGAAAT TGTGAAAAAAGATATTGAACAGTTTGAGGGAATATATCTAGCTGATAGGGATAAAGATTTCAGGGATAAAAGTTTTCAAT TAGTTGAAAAAAATATTAAATCATTATCATCTATAAAAAATATTAGAGGTCTATTAATGGATCAAACTTCTGAAAACGAT TTTATAGTTAAATCTTATATTTCAAAAGAAATAAATGAACTTTTACCTGAACAAAAAGAAAAAATATATAAATGGTTTGA GAAGGAAGTAGATAAAAATATAGAAGAAGTAACGAAAACAATTAAAGGTTATGTAGAGAGAAAGCCCAGTACTATAGAAA AATATTTAAAATTACCAAGTTATATATTACCAGTTAAACTACAATATAATTTATTAGAAGAAATTATAAATATTAATGGA GTAGAGACTTTTGTTGATTCAACTATTGATTATTATTTGAAAAAAGTTGTGAGTAATAGAAATAAATTAGCTCATAGAAA ATTAGTTATGTGTAGGCAGCAACAACATTTATTGCAGTATAATAATATTAATACGTTTCTAAATGATGATTCTAATGTTT GTGATAATCATGAAGGAGATGTAGTTTCAATAGATGATTGGATTCAACTCAGAGTTGAAGTTAAAGAATATGGTAAGTTA TTTGATGATTTGTGGGAGAAAATTAAGTCGTGA
Upstream 100 bases:
>100_bases GTTTAGCACATATTAAAGATATAGTGAATGATATGGATGGAAAAGTATATATTCCTAAGGATAATAAAGAAGGGTTTGAA GTAGAGATGAGATTAACAAA
Downstream 100 bases:
>100_bases AGTATTTTTGTGCTTTTTATTAATTAGATTACGATGTTTAAGGGCTTGAATTAGTCATTAATAAAGACTCTGGTTTCTGT TAGCAACTATGTAAAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MRADLSIMWVEDTTSWYTEQKDLLNMDIESLGIDIEFTRISTIDDFYKLVRNDNTGFSKYDIFFVDYALSSDTEQKGSNI IVKLKDMGLTTDILFYSSKNIREIREIVKKDIEQFEGIYLADRDKDFRDKSFQLVEKNIKSLSSIKNIRGLLMDQTSEND FIVKSYISKEINELLPEQKEKIYKWFEKEVDKNIEEVTKTIKGYVERKPSTIEKYLKLPSYILPVKLQYNLLEEIINING VETFVDSTIDYYLKKVVSNRNKLAHRKLVMCRQQQHLLQYNNINTFLNDDSNVCDNHEGDVVSIDDWIQLRVEVKEYGKL FDDLWEKIKS
Sequences:
>Translated_330_residues MRADLSIMWVEDTTSWYTEQKDLLNMDIESLGIDIEFTRISTIDDFYKLVRNDNTGFSKYDIFFVDYALSSDTEQKGSNI IVKLKDMGLTTDILFYSSKNIREIREIVKKDIEQFEGIYLADRDKDFRDKSFQLVEKNIKSLSSIKNIRGLLMDQTSEND FIVKSYISKEINELLPEQKEKIYKWFEKEVDKNIEEVTKTIKGYVERKPSTIEKYLKLPSYILPVKLQYNLLEEIINING VETFVDSTIDYYLKKVVSNRNKLAHRKLVMCRQQQHLLQYNNINTFLNDDSNVCDNHEGDVVSIDDWIQLRVEVKEYGKL FDDLWEKIKS >Mature_330_residues MRADLSIMWVEDTTSWYTEQKDLLNMDIESLGIDIEFTRISTIDDFYKLVRNDNTGFSKYDIFFVDYALSSDTEQKGSNI IVKLKDMGLTTDILFYSSKNIREIREIVKKDIEQFEGIYLADRDKDFRDKSFQLVEKNIKSLSSIKNIRGLLMDQTSEND FIVKSYISKEINELLPEQKEKIYKWFEKEVDKNIEEVTKTIKGYVERKPSTIEKYLKLPSYILPVKLQYNLLEEIINING VETFVDSTIDYYLKKVVSNRNKLAHRKLVMCRQQQHLLQYNNINTFLNDDSNVCDNHEGDVVSIDDWIQLRVEVKEYGKL FDDLWEKIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39047; Mature: 39047
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADLSIMWVEDTTSWYTEQKDLLNMDIESLGIDIEFTRISTIDDFYKLVRNDNTGFSKY CCCCEEEEEEECCCHHHHHHHHHHHCCHHHHCCEEEEEEECHHHHHHHHHHCCCCCCCEE DIFFVDYALSSDTEQKGSNIIVKLKDMGLTTDILFYSSKNIREIREIVKKDIEQFEGIYL EEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEE ADRDKDFRDKSFQLVEKNIKSLSSIKNIRGLLMDQTSENDFIVKSYISKEINELLPEQKE ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHH KIYKWFEKEVDKNIEEVTKTIKGYVERKPSTIEKYLKLPSYILPVKLQYNLLEEIINING HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHEEHHHHHHHHHCCCC VETFVDSTIDYYLKKVVSNRNKLAHRKLVMCRQQQHLLQYNNINTFLNDDSNVCDNHEGD HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC VVSIDDWIQLRVEVKEYGKLFDDLWEKIKS EEEECHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRADLSIMWVEDTTSWYTEQKDLLNMDIESLGIDIEFTRISTIDDFYKLVRNDNTGFSKY CCCCEEEEEEECCCHHHHHHHHHHHCCHHHHCCEEEEEEECHHHHHHHHHHCCCCCCCEE DIFFVDYALSSDTEQKGSNIIVKLKDMGLTTDILFYSSKNIREIREIVKKDIEQFEGIYL EEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEE ADRDKDFRDKSFQLVEKNIKSLSSIKNIRGLLMDQTSENDFIVKSYISKEINELLPEQKE ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHH KIYKWFEKEVDKNIEEVTKTIKGYVERKPSTIEKYLKLPSYILPVKLQYNLLEEIINING HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHEEHHHHHHHHHCCCC VETFVDSTIDYYLKKVVSNRNKLAHRKLVMCRQQQHLLQYNNINTFLNDDSNVCDNHEGD HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC VVSIDDWIQLRVEVKEYGKLFDDLWEKIKS EEEECHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA