| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is bag [H]
Identifier: 226223277
GI number: 226223277
Start: 693379
End: 694371
Strand: Reverse
Name: bag [H]
Synonym: Lm4b_00674
Alternate gene names: 226223277
Gene position: 694371-693379 (Counterclockwise)
Preceding gene: 226223280
Following gene: 226223276
Centisome position: 23.84
GC content: 41.99
Gene sequence:
>993_bases ATGACTATTTCACAAGTAAAACAGACAGCAAAAGAGTCGCTTCGTGGCAACTGGGGAATTGCCATTGGAATATTTGTGCT TGCTTGGCTAATCGAAACTGTTGGTGGAGGATTAATTGGTTGGATCCCAGTCATTGGTTGGATTGCAATATTCCTACTAA CTGGACCACTTTATACTGGGGTTGCTTGGGTGTACCTAGCAATTAGCCGCCGTGAACAACCAGATGTTGCTTATATGTTT AGTGGTTTTAAACAATTTGGACGTACGGTCTTAGCTTACTTACTAATCTCTATTTTCACATTCTTATGGAGCTTACTCTT AATCGTACCAGGAATTATTAAAACTTACTCTTATTCACAAACATTCTTTATCTTACGAGATAACCCAAATATTTCTGCGC TAGATGCTATTACAGAAAGCCGCCACATGATGAATGGACACAAAGGTAGACTTTTTGGACTATCTCTTACATTCCTTTTA TGGTATTTAATTCCTCTTGCTGTAGCGATTGCAGGTACGGTTATCGTTGCTGGCGGAATGGCTACTACATCTTATACAGC TGATCCTGCTGAAGTACTTTCAGCTCTTGCTGCCGGTGCTACGTTTGGTGGACTCGTGTTAATCTTAGCATCGTGGTTAA TTACTCTTGGTATTTCGCTTTATGTTTATCCTTATCTAATCACTTCTATCGCTGTGTTCTACGATGATTTATACGCAGCA ACAGAAGGCACTTTTACAGAAGAAACGGTCATCGTGGAAGAAGAAGTAAATCCATTTGGAACAACAGAAGCTGATCCATT TGCTGAAGATACACATCCAGAAGGCTTCGGACCAGAGGCAACAAAAGAACCCGAAACGCCTGTAGTACCAGAAGCTCCTG AGGCTCCTGAAACACCAGAAACGCCGGAAGTTCCTGAAACTCCTGAGGCACCCGAGACTCCGGAAGCTCCCGAAACACCG GAAGCTCCAAAAGATAACAATGAACCAAAATAA
Upstream 100 bases:
>100_bases ACTTCTTATTACTGTATTAGTCCTAGAAAATGTGCTATTTTAAAGGTAGGTATTTTTGCTATTATACTTAAAAATAAATG AAAAAGGAGTTTTTACTATG
Downstream 100 bases:
>100_bases AATTACGGCTGGCGGACTGGAATTTCTAGTCCGCTTTGCTGCGCCAACGGACCGTCTGAAAATAAATGACTTAATGATAG ATACAGCTCGCTGGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta antigen; B antigen [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPVIGWIAIFLLTGPLYTGVAWVYLAISRREQPDVAYMF SGFKQFGRTVLAYLLISIFTFLWSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLL WYLIPLAVAIAGTVIVAGGMATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGISLYVYPYLITSIAVFYDDLYAA TEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGFGPEATKEPETPVVPEAPEAPETPETPEVPETPEAPETPEAPETP EAPKDNNEPK
Sequences:
>Translated_330_residues MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPVIGWIAIFLLTGPLYTGVAWVYLAISRREQPDVAYMF SGFKQFGRTVLAYLLISIFTFLWSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLL WYLIPLAVAIAGTVIVAGGMATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGISLYVYPYLITSIAVFYDDLYAA TEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGFGPEATKEPETPVVPEAPEAPETPETPEVPETPEAPETPEAPETP EAPKDNNEPK >Mature_329_residues TISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPVIGWIAIFLLTGPLYTGVAWVYLAISRREQPDVAYMFS GFKQFGRTVLAYLLISIFTFLWSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLLW YLIPLAVAIAGTVIVAGGMATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGISLYVYPYLITSIAVFYDDLYAAT EGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGFGPEATKEPETPVVPEAPEAPETPETPEVPETPEAPETPEAPETPE APKDNNEPK
Specific function: Unknown
COG id: COG5523
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005877 - InterPro: IPR019948 - InterPro: IPR013783 - InterPro: IPR003599 - InterPro: IPR019931 - InterPro: IPR007756 - InterPro: IPR001899 - ProDom: PD008292 [H]
Pfam domain/function: PF00746 Gram_pos_anchor; PF05062 RICH; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 35870; Mature: 35739
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPVIGWIAIFLLTGPLYTG CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VAWVYLAISRREQPDVAYMFSGFKQFGRTVLAYLLISIFTFLWSLLLIVPGIIKTYSYSQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLLWYLIPLAVAIAGTVIVAGGM EEEEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGISLYVYPYLITSIAVFYDDLYAA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGFGPEATKEPETPVVPEAPEAPETPE CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPEVPETPEAPETPEAPETPEAPKDNNEPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPVIGWIAIFLLTGPLYTG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VAWVYLAISRREQPDVAYMFSGFKQFGRTVLAYLLISIFTFLWSLLLIVPGIIKTYSYSQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLLWYLIPLAVAIAGTVIVAGGM EEEEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGISLYVYPYLITSIAVFYDDLYAA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGFGPEATKEPETPVVPEAPEAPETPE CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPEVPETPEAPETPEAPETPEAPKDNNEPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1857207; 8880921 [H]