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The map label for this gene is 226223275

Identifier: 226223275

GI number: 226223275

Start: 692199

End: 692846

Strand: Direct

Name: 226223275

Synonym: Lm4b_00672

Alternate gene names: NA

Gene position: 692199-692846 (Clockwise)

Preceding gene: 226223274

Following gene: 226223278

Centisome position: 23.76

GC content: 36.11

Gene sequence:

>648_bases
GTGGCAAACAAATTTAAAACATTAGATAAGATGGTGTATAATCTACTTCTTGAAAAAATCAAAAACGGCGAGTTAGTGGC
GAATGAACATTTAGCAGAAGAAAAGTTGGCTAGGGAATTCGGTGTTAGCCGGTCGCCAATAAGAAAAGCCATTGCAACGC
TTACTGCTCAAGGTATTGTTAGTTATCACGAAAATAGCGGTGCTGTTTTAAATGATTGTATTGTTGATTCGGATCGCTAT
GTGCAATTGATGGAAACCATTGAAATTTTTGTTGATGCAGCAATTGCGAAAGCAGCTCATTTCGGTTATGAAATGGATTT
GGAGAAATTGTATGCTCGTATGCAAGAGATGGAGCGCCTTTCGTATCTAACTGACATAGAAAATTATTATGATGCACATC
ATCGCTTTATTCTTTGTTTAATCAGTTTTGCGGAAAATCCCTATCAAGTCCGTATCGTCAAGCAAATTTTCTTCCAAATG
ATTCATTTTTCAGATGGAATTAATATGTTTAAATCCGTCGAAATTAGAGAATGGACTAACAAGAAAAGTAACCAAATTTG
TGAGTTGCTCGCAGAAGAGGAAACTGAATTAGCCAGGAAAACAATTAAGTCTATGTTTGCGGAATTAACGATTCAAGCCT
ACAGATAA

Upstream 100 bases:

>100_bases
CAAAGTAGTACCCAAGCTATCAGAAAAAGCAAAACGAAGCAAGCTCATCCATTAATATTTTTTCTGTGATATAATTACGA
GCGAAGAGGGGGCAGACTTT

Downstream 100 bases:

>100_bases
AAAGAGCTGTCACAAAAGTGACAGCTCTTTTTGATATAAATAAAAACCGTTTTTCTTACCAGAAAATTGAAAACCATAGC
GGACATACATTTGATTGAGC

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator; GntR Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSRSPIRKAIATLTAQGIVSYHENSGAVLNDCIVDSDRY
VQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERLSYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQM
IHFSDGINMFKSVEIREWTNKKSNQICELLAEEETELARKTIKSMFAELTIQAYR

Sequences:

>Translated_215_residues
MANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSRSPIRKAIATLTAQGIVSYHENSGAVLNDCIVDSDRY
VQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERLSYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQM
IHFSDGINMFKSVEIREWTNKKSNQICELLAEEETELARKTIKSMFAELTIQAYR
>Mature_214_residues
ANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSRSPIRKAIATLTAQGIVSYHENSGAVLNDCIVDSDRYV
QLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERLSYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQMI
HFSDGINMFKSVEIREWTNKKSNQICELLAEEETELARKTIKSMFAELTIQAYR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25024; Mature: 24893

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSRSPIRKAIATLTAQGIV
CCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SYHENSGAVLNDCIVDSDRYVQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERL
HHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQMIHFSDGINMFKSVEIREWTN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
KKSNQICELLAEEETELARKTIKSMFAELTIQAYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSRSPIRKAIATLTAQGIV
CCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SYHENSGAVLNDCIVDSDRYVQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERL
HHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQMIHFSDGINMFKSVEIREWTN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
KKSNQICELLAEEETELARKTIKSMFAELTIQAYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA