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The map label for this gene is ykoS [H]

Identifier: 226223255

GI number: 226223255

Start: 665897

End: 667576

Strand: Reverse

Name: ykoS [H]

Synonym: Lm4b_00652

Alternate gene names: 226223255

Gene position: 667576-665897 (Counterclockwise)

Preceding gene: 226223268

Following gene: 226223254

Centisome position: 22.92

GC content: 35.95

Gene sequence:

>1680_bases
ATGTGGAAAAAGCATAAGTGGCTAATTATTGCTGTATTATTATTGGTAATTTATGTCGCTCCATTATTTATTCTTGGCGG
GAACAGTCATGTAAGGATTCATGATAACTTGGATTCTAATGTAACTTGGTACAAAATGGTTTTGGATAGCGGGGATTATA
CCGCTAAAGTCGGGACAGCAAATATAGACCAAATAATGGATGACAGTGTCCCCAGAGATTCATTTGATTCAGAGTTTGTT
GGGATTGATTGGCTTTACATGATTTTCAGCACACCCATTGCCTTTGCGATGAGTCAGTTAATTACACGTTTTTTTGCATT
TTTAGGATTATTTTTATGGGCAAGGGATTACCTTATTAAAGATAAAAAATATCTCGTGCCACTTTATTTTGTTTCCTTAG
CTTTTGCGCTAACACCATTTTGGCCATCAGGGATGTTGAGTACGCTTGGAATGCCGCTTGCTCTATGGGCATTTTTAAAT
ATTAGGAATAATAAACGGCGAATTTGGAATGTGGTTATACTGACGTTGCTTCCATTTTATTCTAGTTTAATATTAGGATT
TTGTTTCTTTTTAGTAATGGTTGGATGTATTTGGTTGTACGATGTTTTCAAGAAAAAACAAGTGAATATTCGATTTTTAC
TTAGCATGCTTTATATGACGCTTCTGTATGCACTTGTAAATTATCGTTTTATTTATGCAATGTTTTTGCACCCCGAACCG
GATTCAAGGAGCGAATTTAGTCTACCAGAGTTATCATTTTTAAGTTCTATCCGACTTAGCTTTAAAAATTTCATTATAGG
ACACACGCATGACCAGGCACTGGCTGGATTTGTTATTATACCTGTATTACTCCTTGTACTTGCACTCATTATTATCAAAC
GTGAATGGGGCAAAGAAAAACTGTTTTTATGGCTATTTGGCTTTAATTTATTCTTATCTTTTTGGTATGGATTTTGGTGG
TATCGTGGTTGGAATGTAATCAAAGAACACGTGGAAATCATGCGGACATTTAACTTTTCGCGCTTCCATTTTTTACAACC
GTTTTTATTTTATGGACTGTTTGCACTTGCGATTGTTTATTTAATAAAAAAAGGAAATTGGTGGCGAAAGTTAGCTTATG
TGGTAGTTGCGCTGCAGCTTGTTGTTGTTTTCGCTAATAACTCTGAGATTTACTACCGCACTGGAAATGGCTCGCCAAGC
ATTAATCAATTTTACGCCACGGAGCAAATGGAAGAAATTAAAGATTATATTGGTAAGCCGCAGTCAAGTTACCGTGTCGG
AAGTATTGGTCTGCACCCGTCTGTTTCCCAAGAAAGTGGCTTTTATACTGTCGATGGCTATGTGAATTCCTATCCTCTTG
CTTATAAAAGGGCTTTCCGAAAAATTATTGCTGGTGAGCTAGACAAGAGTCCTGTTTTAGAAGATTATTATGATAATTGG
GGTAATCGTTGTTATATATTTTCTGCCGAATTAGGTAAAAACTACGATTTCGGCAAGGATTCGAAAAAACACATTAAACA
GTTAGATTTTAATTCAGAGGCATTTAAAAAGGTTGGCGGCGAGTATATTCTATCAGCCGTTCCGATTGATAATGCTTCAG
AAGTCGGACTCCAGTTCGAAAAAGCCTTCGATAATAAGGAATCTTACTGGAAAATCTATTTATACAAAGCAACTAAATAA

Upstream 100 bases:

>100_bases
AATTATACCTTTTTTAATGAACAAACCTGGTTTCCTTTGATATAATTGAAAATAGTTTTCTCGGGTACATATATAGTAGA
GATAATGAAGGAGGAGAACT

Downstream 100 bases:

>100_bases
AAGCGTGAGGCGTGATTTTTTCTTAACGAACTAATCGCGCCTTTCGCTTTTTTTGTGGTATGATTAATAAAAGGAGTGAT
GATTATGAAGAAAACCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFV
GIDWLYMIFSTPIAFAMSQLITRFFAFLGLFLWARDYLIKDKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN
IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLYMTLLYALVNYRFIYAMFLHPEP
DSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAGFVIIPVLLLVLALIIIKREWGKEKLFLWLFGFNLFLSFWYGFWW
YRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVVVALQLVVVFANNSEIYYRTGNGSPS
INQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNW
GNRCYIFSAELGKNYDFGKDSKKHIKQLDFNSEAFKKVGGEYILSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATK

Sequences:

>Translated_559_residues
MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFV
GIDWLYMIFSTPIAFAMSQLITRFFAFLGLFLWARDYLIKDKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN
IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLYMTLLYALVNYRFIYAMFLHPEP
DSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAGFVIIPVLLLVLALIIIKREWGKEKLFLWLFGFNLFLSFWYGFWW
YRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVVVALQLVVVFANNSEIYYRTGNGSPS
INQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNW
GNRCYIFSAELGKNYDFGKDSKKHIKQLDFNSEAFKKVGGEYILSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATK
>Mature_559_residues
MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFV
GIDWLYMIFSTPIAFAMSQLITRFFAFLGLFLWARDYLIKDKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN
IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLYMTLLYALVNYRFIYAMFLHPEP
DSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAGFVIIPVLLLVLALIIIKREWGKEKLFLWLFGFNLFLSFWYGFWW
YRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVVVALQLVVVFANNSEIYYRTGNGSPS
INQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNW
GNRCYIFSAELGKNYDFGKDSKKHIKQLDFNSEAFKKVGGEYILSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65367; Mature: 65367

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTA
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCC
NIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLITRFFAFLGLFLWARDYLIK
CHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLNIRNNKRRIWNVVILTLLPFY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLYMTLLYALVNYRFIYAMFLHPEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
DSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAGFVIIPVLLLVLALIIIKREWGKEK
CCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LIKKGNWWRKLAYVVVALQLVVVFANNSEIYYRTGNGSPSINQFYATEQMEEIKDYIGKP
HHHCCCHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
QSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNW
CCCCEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCC
GNRCYIFSAELGKNYDFGKDSKKHIKQLDFNSEAFKKVGGEYILSAVPIDNASEVGLQFE
CCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHEEEECCCCCCHHHCCHHH
KAFDNKESYWKIYLYKATK
HHCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTA
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCC
NIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLITRFFAFLGLFLWARDYLIK
CHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLNIRNNKRRIWNVVILTLLPFY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLYMTLLYALVNYRFIYAMFLHPEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
DSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAGFVIIPVLLLVLALIIIKREWGKEK
CCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LIKKGNWWRKLAYVVVALQLVVVFANNSEIYYRTGNGSPSINQFYATEQMEEIKDYIGKP
HHHCCCHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
QSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNW
CCCCEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCC
GNRCYIFSAELGKNYDFGKDSKKHIKQLDFNSEAFKKVGGEYILSAVPIDNASEVGLQFE
CCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHEEEECCCCCCHHHCCHHH
KAFDNKESYWKIYLYKATK
HHCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]