| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223254
Identifier: 226223254
GI number: 226223254
Start: 665111
End: 665812
Strand: Reverse
Name: 226223254
Synonym: Lm4b_00651
Alternate gene names: NA
Gene position: 665812-665111 (Counterclockwise)
Preceding gene: 226223255
Following gene: 226223253
Centisome position: 22.86
GC content: 37.89
Gene sequence:
>702_bases ATGAAGAAAACCATTCAGTCAGTTGGTGTTTGGGGCGATAGTATTATGAAAGGCGTTCTTTTCAACCCTGAAAAAAATCG CTATACATTGCTTAAAAACAACTGCATTAAACGAGCATCCGAAAAACTTGGCCTGACTTTTCAAAATCATTCCACAATGG GTCGTACGATAACTAAAGGCCATGAAATTCTAACAAAAGACTTAGCAAAAGATGCAACAAATGATATCGCCATTATCGAA TTTGGCGGAAATGATTGTGATTTTAACTGGACGGAAGTTTCCGAAAATCCGACAGCTGAGCACATTCCTAGCACCCCACT TAACATTTTTGAAACGCAATTACTTGAAATGATTGCACGACTAAAAAAACTGGATATTAAACCCATTTTAATGACATTGC CTCCCCTTCACGCAAAACGTTATTTTGAATTCATTACGAGAAATGGACTAAATAAAGATAATATTTTGCAGTTTTTAGGT GGCGATGTAGAGATGATTTATCGCTGGCAGGAACGATATAGCAATACGATTTCGCGCATCGCAGCCGAAACTGGTAGCCA TATTATTGATGTCCGTGATAGTTTTCTCGCTGAATTTCATTATGAAAATTTGCTCTGTGCTGACGGTATTCATCCAAACG AGGCTGGTCATATTGCCATGTCACGCAAATTCATTCAGTACGCAAGTTTTCATAAAGCATAA
Upstream 100 bases:
>100_bases CAAAGCAACTAAATAAAAGCGTGAGGCGTGATTTTTTCTTAACGAACTAATCGCGCCTTTCGCTTTTTTTGTGGTATGAT TAATAAAAGGAGTGATGATT
Downstream 100 bases:
>100_bases GGAGGAATTTTTATTTTACATTTACAAACTATGACTGCTTCTGATTTAGAAGATTTTTTATCTACAGCCATTACAGATTA CGCAAATGAAAAAGTTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipase/Acylhydrolase; Lipolytic; GDSL Family Lipase; GDSL-Like Lipase/Acylhydrolase
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLGLTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIE FGGNDCDFNWTEVSENPTAEHIPSTPLNIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFEFITRNGLNKDNILQFLG GDVEMIYRWQERYSNTISRIAAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHIAMSRKFIQYASFHKA
Sequences:
>Translated_233_residues MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLGLTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIE FGGNDCDFNWTEVSENPTAEHIPSTPLNIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFEFITRNGLNKDNILQFLG GDVEMIYRWQERYSNTISRIAAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHIAMSRKFIQYASFHKA >Mature_233_residues MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLGLTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIE FGGNDCDFNWTEVSENPTAEHIPSTPLNIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFEFITRNGLNKDNILQFLG GDVEMIYRWQERYSNTISRIAAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHIAMSRKFIQYASFHKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26601; Mature: 26601
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLGLTFQNHSTMGRTITKG CCCCHHHHCCCHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHCEEECCCCCCCCHHHHH HEILTKDLAKDATNDIAIIEFGGNDCDFNWTEVSENPTAEHIPSTPLNIFETQLLEMIAR HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCCCCHHHHHHHHHHHHHH LKKLDIKPILMTLPPLHAKRYFEFITRNGLNKDNILQFLGGDVEMIYRWQERYSNTISRI HHHCCCCHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHIAMSRKFIQYASFHKA HHHHCCEEEEHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLGLTFQNHSTMGRTITKG CCCCHHHHCCCHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHCEEECCCCCCCCHHHHH HEILTKDLAKDATNDIAIIEFGGNDCDFNWTEVSENPTAEHIPSTPLNIFETQLLEMIAR HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCCCCHHHHHHHHHHHHHH LKKLDIKPILMTLPPLHAKRYFEFITRNGLNKDNILQFLGGDVEMIYRWQERYSNTISRI HHHCCCCHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHIAMSRKFIQYASFHKA HHHHCCEEEEHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA