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The map label for this gene is esaB [H]

Identifier: 226222704

GI number: 226222704

Start: 70841

End: 71092

Strand: Direct

Name: esaB [H]

Synonym: Lm4b_00068

Alternate gene names: 226222704

Gene position: 70841-71092 (Clockwise)

Preceding gene: 226222703

Following gene: 226222705

Centisome position: 2.43

GC content: 34.13

Gene sequence:

>252_bases
ATGGCTAAAAACACACATATGAATGTGACAGTTGATTTCACTAATTGGGGAGCAAGCAAGTATGATTTGCGAATTCCGGT
GCATCAACCAATCAAAGCATTAATTATCAATTTGGCAGAAACGCTCAAAATCGATTACAAAGATTTGTCCAAATGTACGA
TAAAAACAACGAATAAAGCGATATTACTAAGCGATGATGACAAATTGACTAATTTTCAAATTGCGGACGGAGACATCTTA
GAAATTTTATAG

Upstream 100 bases:

>100_bases
AAACAGTTGGTGGAGCAATTGCAGGAACACTTGTAGCTTTAGCAGGCGGGATTTATGTGGCTGCGCGCAATGTTTTTGAA
TAGAAAGCGGGGAGTTTTAA

Downstream 100 bases:

>100_bases
AAAAAAAGGAGAATAAAAACGATGAATAAGACAATTGAAATGGACGGAACAACTTACGATTTTACTTATGAGGATCTAGT
TTGGAGCATTACGTTTCCAA

Product: YukD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDIL
EIL

Sequences:

>Translated_83_residues
MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDIL
EIL
>Mature_82_residues
AKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILE
IL

Specific function: Seems to regulate secreted factors that contribute to the establishment of persistent infections in the host. Negative regulator of EsaC, which is a secretion substrate of the Ess pathway in many Staphylococcus strains. Not necessary for the production an

COG id: COG5417

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the esaB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014921 [H]

Pfam domain/function: PF08817 YukD [H]

EC number: NA

Molecular weight: Translated: 9375; Mature: 9244

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKA
CCCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCCEEEEEECCCE
ILLSDDDKLTNFQIADGDILEIL
EEEECCCCCEEEEECCCCEEEEC
>Mature Secondary Structure 
AKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKA
CCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCCEEEEEECCCE
ILLSDDDKLTNFQIADGDILEIL
EEEECCCCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA