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The map label for this gene is yybT [H]

Identifier: 226222697

GI number: 226222697

Start: 61017

End: 62990

Strand: Direct

Name: yybT [H]

Synonym: Lm4b_00061

Alternate gene names: 226222697

Gene position: 61017-62990 (Clockwise)

Preceding gene: 226222696

Following gene: 226222698

Centisome position: 2.09

GC content: 42.65

Gene sequence:

>1974_bases
ATGTCAGGCTATTTTCAAAAACGAATGCTTAAATATCCACTATACGGTCTGATTGCAGCGACAATTATTTTGAGCGTAAT
CACGTTCTTTTTTTCGTGGTGGCTATCGGCGTTAGTTGTTGTTGGCGGAATTATTCTTACGGTTGCGATGTTTTATTTTG
AATATCGCTTGAATGAAGATGTGCAACTATATGTTTCTAATTTAACGTATCGGATTAAGCGTAGTGAAGAAGAAGCGCTT
GTTGAGATGCCGATGGGAATACTTCTGTATGATGAACATTACAAAATCGAATGGGTTAACCCGTTTATGTCGAAATACTT
TGATAAGGCAGAGCTAATTGGGGAATCTTTGGAAGAAGTAGGACCTGAATTTTTGGACGTTATTACTGGGAATGATGAGA
AGGGGATTATGTCGATTGCTTGGCGTGATCACCGTTTTGATACGATAGTAAAGCGTAAGGAACGGATTTTGTATTTATAT
GACCGAACAGAATATTATGATTTAAATAAGAAGTTTCAGGCGAATAAATCTGTTTTTGCGGTTATTTTCTTAGATAATTA
TGATGAATGGGCGCAGGGCATGGATGATAGACGTCGCAGTGCTTTAAATAATTTGGTGACGTCAATGTTGACTAACTGGG
CCAGAGAACATCGTATTTATTTGAAACGGATTTCGACAGACCGCTTTATGGCCTTTTTGACGGAGGAAATGTTGAAGCGG
TTGGAGGAAGAGAAGTTTCAAATCTTGGACCGGATTCGCGAACGGACGTCGAAGCAAAATATTCCATTAACGCTTAGTAT
TGGGATTGGTTATAAGGAAGATGATTTGATTCAGCTGGCCGATTTGGCACAGTCTAGTCTGGACCTTGCTTTAGGGCGCG
GCGGAGATCAGGTCGTAATTAAGCAACCTGAAGGAAAAGTGCGTTTTTATGGCGGGAAAACAAATCCGATGGAAAAACGG
ACTCGTGTTCGCGCACGTGTTATCTCGCAAGCCTTGCAAGAGTTGATTACGCAAAGTGACCAAGTTTTTGTTATGGGGCA
CCGCTATCCGGATATGGACGTAATTGGTTCGAGTCTTGGAGTGATGCGGATTGCGGAGATGAATGATCGGAATGCTTATG
TGGTCGTGGAACCTGGCAAAATGAGTCCAGATGTGAAGCGATTAATGAATGAAATTGAAGAATATCCAAATGTGATTAAA
AATATAGTTACACCGCAAGTCGCGCTAGAAAATATCACGGAGAAGAGTTTGCTTGTGGTTGTTGATACGCACAAACCTTC
GATGGTTATTAATAAGGAATTGCTTGACTCGGCTACGAATGTGGTGGTTGTCGATCACCATCGTCGTTCAGAGGAATTTG
TCGGAAGCCCGGTGCTTGTTTATATCGAACCATATGCGTCATCTACTGCCGAATTGATTACGGAGCTGTTTGAGTATCAA
CCGGATTTAGAGCAGGTTGGGAAAATCGAGGCAACGGCGCTTCTTTCCGGGATTGTGGTTGATACGAAGAACTTTACGCT
ACGGACTGGGTCGCGAACGTTCGATGCGGCGAGCTATTTACGGTCGCTTGGTGCGGACACGATTTTGGTTCAGCAATTTT
TGAAGGAAGATATTACTACTTTTACTCAGCGGAGTCGTTTAGTTGAGTCGCTTGAAATTTATCATGATGGTATGGCGATT
GCGACTGGACATGAAGACGAGGAATTTGGCACAGTTATAGCTGCGCAGGCGGCAGATACGATGCTTTCGATGGAAGGCGT
GCAGGCATCCTTTGTTATTACGCTACGTCCGGATAAATTAATCGGGATTAGCGCGAGATCGCTTGGTCAAATCAATGTGC
AAGTCATTATGGAAAAACTAGGCGGTGGCGGACATTTATCGAATGCAGCCACACAGCTTAAAGATGTTACAATTGCAGAA
GCAGAAAAACAATTAATTAGCGCCATTGATGCGTATTGGAAGGGAGAAACATAA

Upstream 100 bases:

>100_bases
AGGTAAAATAATAGTGATGAATTGTTAGTTAAGTTTATGTTATGATATAGATACTCAAATTCAGACAAAAGGTATGTAAA
AAAATGGGGAGCTGGATGAA

Downstream 100 bases:

>100_bases
TTATGAAAGTTATTTTCTTGAAAGACGTAAAAGGTAAAGGTAAAAAAGGTGAAACTAAAAATGTTGCTGATGGTTATGCA
AACAATTTTTTAATTAAAAA

Product: YybT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEAL
VEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLY
DRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKR
TRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIK
NIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQ
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAI
ATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAE
AEKQLISAIDAYWKGET

Sequences:

>Translated_657_residues
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEAL
VEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLY
DRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKR
TRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIK
NIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQ
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAI
ATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAE
AEKQLISAIDAYWKGET
>Mature_656_residues
SGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALV
EMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYD
RTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRL
EEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRT
RVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKN
IVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQP
DLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIA
TGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEA
EKQLISAIDAYWKGET

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 74848; Mature: 74717

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNED
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEV
CEEEEEHHEEEEECCHHHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHH
GPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFA
CHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCEEEECCCHHCCCCCEEE
VIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVI
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLG
ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCC
VMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVV
CEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
VDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQ
EECCCCCCEECHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCC
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITT
CCHHHHCCHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKL
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEHHHHHHHHHHCCCCEEEEEEECCCCE
IGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET
EEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNED
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEV
CEEEEEHHEEEEECCHHHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHH
GPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFA
CHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCEEEECCCHHCCCCCEEE
VIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVI
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLG
ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCC
VMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVV
CEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
VDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQ
EECCCCCCEECHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCC
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITT
CCHHHHCCHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKL
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEHHHHHHHHHHCCCCEEEEEEECCCCE
IGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET
EEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]