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The map label for this gene is 226222693

Identifier: 226222693

GI number: 226222693

Start: 57954

End: 58568

Strand: Direct

Name: 226222693

Synonym: Lm4b_00057

Alternate gene names: NA

Gene position: 57954-58568 (Clockwise)

Preceding gene: 226222692

Following gene: 226222694

Centisome position: 1.99

GC content: 35.61

Gene sequence:

>615_bases
TTGAGTAATTTTACTGCAAAAGTCCCTTTGTCAGAAAGAATGGCGGATGTGCTGATTTCGAAAGACCGCTGGAAAGATGA
TGAAGAAGGTTATTTAAAAGTAAAATATGGACTGGAAATAATTCTAATTAATGTCATGAAGTTTGCTCTCGTATACGGTA
TTGCCTTAGTAACAGGGTTATTACTGCAAACAGTGACAGTACATCTGTCATATTTATGGCTCAGACGGTATTCTTTTGGA
TTACATGCAACCAAAACATTGAATTGCACGTTAATTAGCTTGATGATGTTTGTGCTTGCGCCATTTGTTTTTCAAAATAT
CCCCTCTAATAATTGGATTGTTTTAGGTACATTTGGATTTATACTGCTCAACATGTTTCTATTCGCTCCGGCAGACACAG
AAAGTTTGCCTTTAATCGGTGAAGAACACCGGAAAACACTAAAAAGAAAAGCGATGATAGGGACGCTAATTTTAACGGGA
ATTGCGTTGCTAATACCATTCGCAGAGATGAAAACATTAATCATGGTAGGATCTTTGTTTCAGGTGATAAGTATTAATCC
ACTTACTTACAAACTATTGAAAAGGAGGTATCGGAACTATGAAAAATATGAATAA

Upstream 100 bases:

>100_bases
TTGCTCTTTTTTGGTCGTTCATGACAAGAATCGGACATTTCATTACATTTTTGGTTATTATGGGTAAATTCGTTGTAAAA
TATTAGTGGAGGTGAATTAG

Downstream 100 bases:

>100_bases
ATCAGTTGGTAAATTCCTTTCTAGAAAACTAGAAGAACAATCCATGAAAGTTGCGGATTCTTCTATGAGTAAAGCTTGTT
TCATGTTTGTATACGAACCA

Product: putative accessory gene regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFG
LHATKTLNCTLISLMMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTG
IALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE

Sequences:

>Translated_204_residues
MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFG
LHATKTLNCTLISLMMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTG
IALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE
>Mature_203_residues
SNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGL
HATKTLNCTLISLMMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGI
ALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE

Specific function: May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor (Potential) [H]

COG id: COG4512

COG function: function code OTK; Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AgrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006741 [H]

Pfam domain/function: PF04647 AgrB [H]

EC number: NA

Molecular weight: Translated: 23420; Mature: 23289

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGL
CCCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLMMFVLAPFVFQNIPSNNWIVLGTFGF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
ILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLF
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVISINPLTYKLLKRRYRNYEKYE
HHHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGL
CCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLMMFVLAPFVFQNIPSNNWIVLGTFGF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
ILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLF
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVISINPLTYKLLKRRYRNYEKYE
HHHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]