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The map label for this gene is yhbH [C]

Identifier: 225862022

GI number: 225862022

Start: 2078893

End: 2079441

Strand: Reverse

Name: yhbH [C]

Synonym: SPT_2224

Alternate gene names: 225862022

Gene position: 2079441-2078893 (Counterclockwise)

Preceding gene: 225862023

Following gene: 225862021

Centisome position: 98.45

GC content: 34.06

Gene sequence:

>549_bases
ATGATTAAATATAGTATCCGTGGTGAAAACCTAGAAGTAACAGAAGCAATTCGTGATTATGTAGTTTCTAAACTCGAAAA
GATCGAAAAGTACTTCCAACCAGAACAAGAGTTGGATGCCCGAATTAACTTAAAAGTTTATCGTGAAAAAACGGCTAAAG
TGGAAGTAACGATTCCGCTTGGATCTATTACTCTCCGCGCAGAAGATGTATCTCAAGATATGTATGGTTCAATTGACCTT
GTAACTGATAAAATTGAACGTCAGATTCGTAAAAATAAAACAAAAATCGAGCGTAAAAATAAAAATAAGGTAGCAACTGG
TCAATTATTTACAGATGCTTTGGTGGAAGATTCAAATATTGTCCAGTCTAAAGTTGTTCGTTCAAAACAAATTGATTTAA
AACCAATGGATTTGGAAGAAGCAATTCTACAAATGGATTTATTGGGGCATGATTTCTTTATCTATGTGGATGTTGAAGAT
CAGACAACCAATGTGATTTATCGTCGTGAGGATGGCGAAATTGGTTTGTTAGAGGTTAAAGAATCTTAA

Upstream 100 bases:

>100_bases
ACATTTTCCCTTGTAAGATGAGGAAAAAATTTGCAAAAATAGAATGAAAGCGTTATAATAAAATCATAAAAACAAAAATG
TTTAGAAAGAAGGTACTCAT

Downstream 100 bases:

>100_bases
TTTCAATATGTGTAAAGGTAGGTTTACTGAATTGTAAACTACCTTTTTCTTATAATTGATAGAATTACTGATTACACTTT
TAAAAAGTCGCTTTTTGAGG

Product: ribosome-associated protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPLGSITLRAEDVSQDMYGSIDL
VTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVED
QTTNVIYRREDGEIGLLEVKES

Sequences:

>Translated_182_residues
MIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPLGSITLRAEDVSQDMYGSIDL
VTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVED
QTTNVIYRREDGEIGLLEVKES
>Mature_182_residues
MIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPLGSITLRAEDVSQDMYGSIDL
VTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVED
QTTNVIYRREDGEIGLLEVKES

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=103, Percent_Identity=36.8932038834951, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21099; Mature: 21099

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPL
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEEEEECCCCEEEEEEEE
GSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNI
CEEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCHH
VQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVEDQTTNVIYRREDGEIGLLEVK
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEE
ES
CC
>Mature Secondary Structure
MIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPL
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEEEEECCCCEEEEEEEE
GSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNI
CEEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCHH
VQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVEDQTTNVIYRREDGEIGLLEVK
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEE
ES
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA