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The map label for this gene is ssuC [C]

Identifier: 225862015

GI number: 225862015

Start: 2071969

End: 2072730

Strand: Reverse

Name: ssuC [C]

Synonym: SPT_2217

Alternate gene names: 225862015

Gene position: 2072730-2071969 (Counterclockwise)

Preceding gene: 225862016

Following gene: 225862014

Centisome position: 98.13

GC content: 42.78

Gene sequence:

>762_bases
TTGATGAGAAACTTGAAAAGTATACTGAGACGACACATTAGTCTATTGGGCTTTCTCGGAGTATTGTCAATCTGGCAGTT
AGCAGGTTTTCTTAAACTTCTCCCCAAGTTTATCCTGCCGACACCTCTTGAAATTCTCCAGCCCTTTGTTCGTGACAGAG
AATTTCTCTGGCACCATAGCTGGGCGACCTTGAGAGTGGCTTTACTGGGGCTGATTTTGGGAGTTTTGATTGCCTGTCTT
ATGGCTGTGCTCATGGATAGTTTGACTTGGCTCAATGACCTGATTTACCCTATGATGGTGGTCATTCAGACCATTCCGAC
CATTGCCATAGCTCCTATCCTGGTCTTGTGGCTAGGTTATGGGATTTTGCCCAAGATTGTCTTGATTATCTTAACGACAA
CCTTTCCCATCATCGTTAGTATTTTGGACGGTTTTAGGCATTGTGACAAGGATATGCTGACCTTGTTTAGTCTGATGCGG
GCCAAGCCTTGGCAAATCCTGTGGCATTTTAAAATCCCGGTTAGCCTGCCTTACTTTTATGCAGGTCTGAGGGTCAGTGT
CTCCTACGCCTTTATCACAACTGTGGTATCTGAGTGGTTGGGAGGTTTTGAAGGTCTTGGTGTTTATATGATTCAGTCTA
AAAAACTGTTTCAGTATGATACCATGTTTGCCATTATTATTCTGGTGTCGATTATCAGTCTTTTGGGTATGAAGCTGGTC
GATATCAGTGAAAAATATGTGATTAAATGGAAACGTACTTAA

Upstream 100 bases:

>100_bases
GAGCTTATGCGCATTCTAAAAGAAGCGCTGGAAGTGGCAGGGCAGGAGGCAGACAATGTCTTTGCCAATGTCAAAATAAA
TGTAGGAGAGATTTTAAGTA

Downstream 100 bases:

>100_bases
AATAGAGCGTTTTTGAAAAAGAAAAGAGGAAATCAAAATGAAGAAAACATGGAAAGTGTTTTTAACGCTTGTAACAGCTC
TTGTAGCTGTTGTGCTTGTG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MMRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACL
MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMR
AKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLV
DISEKYVIKWKRT

Sequences:

>Translated_253_residues
MMRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACL
MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMR
AKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLV
DISEKYVIKWKRT
>Mature_253_residues
MMRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACL
MAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMR
AKPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLV
DISEKYVIKWKRT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=239, Percent_Identity=24.6861924686192, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786564, Length=218, Percent_Identity=28.4403669724771, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29037; Mature: 29037

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHEEEEECC
>Mature Secondary Structure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CCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]