Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
---|---|
Accession | NC_012469 |
Length | 2,112,148 |
Click here to switch to the map view.
The map label for this gene is 225861959
Identifier: 225861959
GI number: 225861959
Start: 2000571
End: 2002451
Strand: Reverse
Name: 225861959
Synonym: SPT_2154
Alternate gene names: NA
Gene position: 2002451-2000571 (Counterclockwise)
Preceding gene: 225861960
Following gene: 225861958
Centisome position: 94.81
GC content: 46.2
Gene sequence:
>1881_bases ATGGTAAGATTTACAGGACTTAGTCCCAAACAAACGCAAGCTATTGAGGTTTTAAAAGGTCATATTTCTCTACCAGATGT GGAAGTGGCTGTCACTCAGTCTGACCAAGCCTCTATCTCTATCGAGGGTGAGGAAGGTCACTATCAATTGACCTACCGCA AACCTCACCAACTTTATCGTGCCTTGTCCTTGTTGGCAACAGTTCTAGCAGAAGCTGATAAAGTAGAGATTGAGGAACAA GCAGCTTACGAAGATTTGGCTTACATGGTTGACTGTTCTCGAAATGCGGTGCTGAATGTCGCTTCTGCCAAGCAGATGAT TGAGGTCTTGGCTCTCATGGGCTACTCAACCTTTGAGCTTTACATGGAAGACACTTACCAGATTGAAGGACAGCCTTACT TTGGCTATTTCCGTGGAGCTTATTCAGCAGAGGAGTTGCAGGAAATCGAAGCCTATGCTCAACAGTTTGACATGACCTTT GTACCATGCATCCAGACCTTGGCCCACTTGTCGGCCTTTGTCAAATGGGGTGTCAAGGAAGTGCAGGAGCTCCGTGATGT AGAGGACATTCTTCTCATTGGCGAAGAAAAGGTTTATGACCTGATTGATGGCATGTTTGCCACGTTGTCTAAACTGAAGA CTCGCAAGGTCAATATCGGGATGGACGAAGCCCACTTGGTTGGTTTGGGACGCTACCTGATTCTGAACGGTGTTGTGGAT CGTAGTCTCCTCATGTGCCAACACTTGGAGCGCGTGCTGGATATTGCTGACAAATATGGTTTCCACTGCCAGATGTGGAG TGATATGTTCTTCAAACTCATGTCAGCGGATGGCCAGTACGATCGTGATGTGGAAATTCCAGAGGAAACTCGTGTCTACC TAGACCGTCTCAAAGACCGTGTGACTCTGGTTTACTGGGATTATTATCAGGATAGCGAGGAAAAATACAACCGTAATTTC CGCAATCATCACAAGATTAGCCATGACCTTGCATTTGCAGGGGGAGCTTGGAAGTGGATTGGCTTTACACCTCACAACCA TTTTAGCCGTCTAGTGGCTATCGAGGCTAATAAAGCCTGCCGTGCCAATCAGATTAAAGAAGTCATCGTAACGGGTTGGG GAGACAATGGTGGTGAAACTGCCCAGTTCTCTATCCTACCAAGCTTGCAAATCTGGGCAGAACTCAGCTATCGCAATGAC CTAGATAGTTTGTCTGCGCACTTCAAGACCAATACTGGTCTAACGGTTGAAGATTTTATGCAGATTGACCTTGCCAACCT CTTACCAGACCTACCAGGTAATCTCAGTGGCATCAATCCCAACCGATATGTCTTTTATCAGGATGTTCTCTGTCCGATAC TTGACCGACACATGACACCTGAACAGGACAAGCCACACTTCGCTCAGGCGGCGGGAACTATTGCTGACATTAAAGAAAAA GCTGGAAACTATGCTTATCTCTTTGAAACTCAGGCCCAGTTGAATGCTATTTTAAGTAGCAAAGTAGATGTGGGACGACG CATTCGTCAGGCCTACCAAGCGGATGATAAAGAAAGTTTACAACAAATCGCCAGACAAGAATTACCAGAACTTAGAAGCC AAATTGAAGACTTCCATGCCCTCTTTAGTCACCAATGGCTGAAAGAAAACAAGGTCTTTGGTTTGGATACAGTTGACATC CGTATGGGCGGACTCTTGCAACGCATCAAACGAGCAGAAAGCCGTATCGAGGTTTATCTGGCTGGCCAGCTTGACCGCAT CGACGAGCTGGAAGTTGAAATCCTACCATTTACTGACTTCTACGCAGACAAGGATTTCGCAGCAACTACAGCTAACCAGT GGCATACCATTGCGACAGCTTCGACGATTTATACGACTTAA
Upstream 100 bases:
>100_bases ACGAAGAATACACGGTCGCACCAGTTATCCAGGCCTGCACCTATCACGCAGATGCCAATCTCTACGGTGCTCTTGTCAAC TGGCTACAGGAGGAAAAGCA
Downstream 100 bases:
>100_bases TACTCTTCGAAAATCTCTTCAAACCACGTCAGCTTCCATCTACAACCTCAAAACAGTGTTTTGAGCAGCCTGCAGCTAGC TTCCTAGTTTGCTCTTTGAT
Product: N-acetyl-beta-D-glucosaminidase
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosyl Hydrolase-Related Protein; Glycoside Hydrolase; N-Acetyl-Beta-Hexosaminidase
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIEGEEGHYQLTYRKPHQLYRALSLLATVLAEADKVEIEEQ AAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFELYMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTF VPCIQTLAHLSAFVKWGVKEVQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVD RSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVEIPEETRVYLDRLKDRVTLVYWDYYQDSEEKYNRNF RNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKACRANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRND LDSLSAHFKTNTGLTVEDFMQIDLANLLPDLPGNLSGINPNRYVFYQDVLCPILDRHMTPEQDKPHFAQAAGTIADIKEK AGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHALFSHQWLKENKVFGLDTVDI RMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDFYADKDFAATTANQWHTIATASTIYTT
Sequences:
>Translated_626_residues MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIEGEEGHYQLTYRKPHQLYRALSLLATVLAEADKVEIEEQ AAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFELYMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTF VPCIQTLAHLSAFVKWGVKEVQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVD RSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVEIPEETRVYLDRLKDRVTLVYWDYYQDSEEKYNRNF RNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKACRANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRND LDSLSAHFKTNTGLTVEDFMQIDLANLLPDLPGNLSGINPNRYVFYQDVLCPILDRHMTPEQDKPHFAQAAGTIADIKEK AGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHALFSHQWLKENKVFGLDTVDI RMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDFYADKDFAATTANQWHTIATASTIYTT >Mature_626_residues MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIEGEEGHYQLTYRKPHQLYRALSLLATVLAEADKVEIEEQ AAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFELYMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTF VPCIQTLAHLSAFVKWGVKEVQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVD RSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVEIPEETRVYLDRLKDRVTLVYWDYYQDSEEKYNRNF RNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKACRANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRND LDSLSAHFKTNTGLTVEDFMQIDLANLLPDLPGNLSGINPNRYVFYQDVLCPILDRHMTPEQDKPHFAQAAGTIADIKEK AGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHALFSHQWLKENKVFGLDTVDI RMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDFYADKDFAATTANQWHTIATASTIYTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.52
Molecular weight: Translated: 71592; Mature: 71592
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIEGEEGHYQLTYRKPHQLYR CEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCHHHHHH ALSLLATVLAEADKVEIEEQAAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFEL HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCEEE YMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTFVPCIQTLAHLSAFVKWGVKE EECCEEEECCCCEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVD HHHHHCHHHHEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH RSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVEIPEETRVYLDRLKDR HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC VTLVYWDYYQDSEEKYNRNFRNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKAC EEEEEEECCCCCHHHHHCCHHHHHCCHHHHEECCCCEEEEECCCCCCCCEEEEEECCCCC RANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRNDLDSLSAHFKTNTGLTVEDFM CHHCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH QIDLANLLPDLPGNLSGINPNRYVFYQDVLCPILDRHMTPEQDKPHFAQAAGTIADIKEK HHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFSHQWLKENKVFGLDTVDIRMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDF HHHHHHHHCCCEECCEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECHHH YADKDFAATTANQWHTIATASTIYTT HCCCCCCCCCCCCCEEEEECCEEECC >Mature Secondary Structure MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIEGEEGHYQLTYRKPHQLYR CEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCHHHHHH ALSLLATVLAEADKVEIEEQAAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFEL HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCEEE YMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTFVPCIQTLAHLSAFVKWGVKE EECCEEEECCCCEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVD HHHHHCHHHHEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH RSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVEIPEETRVYLDRLKDR HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC VTLVYWDYYQDSEEKYNRNFRNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKAC EEEEEEECCCCCHHHHHCCHHHHHCCHHHHEECCCCEEEEECCCCCCCCEEEEEECCCCC RANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRNDLDSLSAHFKTNTGLTVEDFM CHHCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH QIDLANLLPDLPGNLSGINPNRYVFYQDVLCPILDRHMTPEQDKPHFAQAAGTIADIKEK HHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFSHQWLKENKVFGLDTVDIRMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDF HHHHHHHHCCCEECCEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECHHH YADKDFAATTANQWHTIATASTIYTT HCCCCCCCCCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA