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The map label for this gene is nosD [H]

Identifier: 225686123

GI number: 225686123

Start: 259715

End: 261109

Strand: Direct

Name: nosD [H]

Synonym: BMEA_B0277

Alternate gene names: 225686123

Gene position: 259715-261109 (Clockwise)

Preceding gene: 225686122

Following gene: 225686124

Centisome position: 21.91

GC content: 58.57

Gene sequence:

>1395_bases
ATGGTTCTCCCCCGCCTGTTCCGTACCGCTGGCATCATGAGCCTGCTTGCCGCCGCACTTTGCGCAGGCGCGCAGGCAAG
GCAGATCGATGTTGCTGTCGGAGAAAGTGTACAGGCGGCTATTGAAAAAGCCGAGCCGGGCGATGTGGTCCGGCTCCGTG
CCGGAAGGCATGAAGGCGCGGTCGTCATTGACCGCGCCATCGAACTGACCGGAGAGCCGGGCGCCGTCCTCGACGGCCTT
GGCACCGGCAATGCGATCACGGTCAATGCGCCGAACGCCATTGTGCGCGGCCTGGAAGTCCACGGATCTGGCGACAACCT
GCCTGATCTTCATTCGGGCATTTTTGTTTCCAGAACGGCCACCGGCGCGCGCGTGGAAAACAACCGGCTGATCGGCAATA
CCTATGGAATTTACCTGCATGGAGCGGCGGATTCGATTGCCATTGGCAATGAAGTGCTGGGCCGCCGCGGTGTGCGCATG
GCCGAAACCGGCAGCGGCGTTTCAGTCTGGAATGCGCCCGGTGCGCAGGTCGTGGGCAACACGATCCGCTATGGCCGCGA
CGGCATCTATACCAATGCCAGCCGCAAGAATATTTTCCGCGACAATGTGATGGAGGATGTGCGCTTTGCCGTCCATTACA
TGTATACCGACGACAGTGCGGTGATCGGCAATGTCTCGCGCAACAATTCGGTCGGTTTCGCGATCATGTACACCAACCGG
CTGAAGATCCTGAACAATGTGTCGGAGGGCGACCGCGATCACGGTCTTCTCCTGAACTACGCCAATAGCTCGATCATTAC
GGGCAATCGCGTCGTCGGGCGGATGCAGCCGATAGAACGCTGGCTGGAGGCGGGCCTTCAAAAGGGTGAACACGGTGTGC
CGGGCGAGGAAAAGGTGGAAGCCTCAGCCGGCGAAACCGCGCGGCTCGGCCCTGAAAAATGCGTCTTCATCTATAACGCC
AACAAGAACAAATTCAGCGAAAACAGCTTCGAGAATTGCAGCATCGGCATTCATTTCACGGCGGGTTCGGAAGGCAATGC
CATGAGCGGCAATTCCTTCATCAACAACCGCAATCAGGTGAAATATGTCGGCACGCGCAATCTCGACTGGTCTGTCGATG
GGCGCGGCAATTACTGGAGCGACAATCCCGCCTTTGATCTCGATGGCGACGGCATTGCGGATAGCCCCTATCGCCCGAAT
GATCTGATCGACCGGGTTCTGTGGACCGTGCCGCAGGCAAAAATCCTCATCAACAGCCCTGCTGTCGATACGATCCGCTG
GGCGCAGACGCAGTTTCCCGCCCTTCTTCCCGGTGGTGTTGTGGACAGCCATCCCCTCATGAAGCCTCTTCTCAAGCCAA
CGGCCCAGCTTAAAGAAAGCAAGCACAATGACTGA

Upstream 100 bases:

>100_bases
AGCCGGGTGTGTGGTGGTATTACTGCTCGTGGTTCTGCCACGCCATGCATATGGAAATGCAGGGCCGTATGCTCGTCGAA
CCGAAAAAGGCCTGACGGAC

Downstream 100 bases:

>100_bases
GCATCGGAACGCAGAAAAGCGCCATTTGCAGACCGGCATGGCGACTTTTGGAACAGGCTCCGAGACTGTTGTTCTTGATA
AGGTTACCAAGTCCTATGGC

Product: copper-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MVLPRLFRTAGIMSLLAAALCAGAQARQIDVAVGESVQAAIEKAEPGDVVRLRAGRHEGAVVIDRAIELTGEPGAVLDGL
GTGNAITVNAPNAIVRGLEVHGSGDNLPDLHSGIFVSRTATGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGVRM
AETGSGVSVWNAPGAQVVGNTIRYGRDGIYTNASRKNIFRDNVMEDVRFAVHYMYTDDSAVIGNVSRNNSVGFAIMYTNR
LKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMQPIERWLEAGLQKGEHGVPGEEKVEASAGETARLGPEKCVFIYNA
NKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQVKYVGTRNLDWSVDGRGNYWSDNPAFDLDGDGIADSPYRPN
DLIDRVLWTVPQAKILINSPAVDTIRWAQTQFPALLPGGVVDSHPLMKPLLKPTAQLKESKHND

Sequences:

>Translated_464_residues
MVLPRLFRTAGIMSLLAAALCAGAQARQIDVAVGESVQAAIEKAEPGDVVRLRAGRHEGAVVIDRAIELTGEPGAVLDGL
GTGNAITVNAPNAIVRGLEVHGSGDNLPDLHSGIFVSRTATGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGVRM
AETGSGVSVWNAPGAQVVGNTIRYGRDGIYTNASRKNIFRDNVMEDVRFAVHYMYTDDSAVIGNVSRNNSVGFAIMYTNR
LKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMQPIERWLEAGLQKGEHGVPGEEKVEASAGETARLGPEKCVFIYNA
NKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQVKYVGTRNLDWSVDGRGNYWSDNPAFDLDGDGIADSPYRPN
DLIDRVLWTVPQAKILINSPAVDTIRWAQTQFPALLPGGVVDSHPLMKPLLKPTAQLKESKHND
>Mature_464_residues
MVLPRLFRTAGIMSLLAAALCAGAQARQIDVAVGESVQAAIEKAEPGDVVRLRAGRHEGAVVIDRAIELTGEPGAVLDGL
GTGNAITVNAPNAIVRGLEVHGSGDNLPDLHSGIFVSRTATGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGVRM
AETGSGVSVWNAPGAQVVGNTIRYGRDGIYTNASRKNIFRDNVMEDVRFAVHYMYTDDSAVIGNVSRNNSVGFAIMYTNR
LKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMQPIERWLEAGLQKGEHGVPGEEKVEASAGETARLGPEKCVFIYNA
NKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQVKYVGTRNLDWSVDGRGNYWSDNPAFDLDGDGIADSPYRPN
DLIDRVLWTVPQAKILINSPAVDTIRWAQTQFPALLPGGVVDSHPLMKPLLKPTAQLKESKHND

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 49972; Mature: 49972

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPRLFRTAGIMSLLAAALCAGAQARQIDVAVGESVQAAIEKAEPGDVVRLRAGRHEGA
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCC
VVIDRAIELTGEPGAVLDGLGTGNAITVNAPNAIVRGLEVHGSGDNLPDLHSGIFVSRTA
EEEEEEEEECCCCCCEEECCCCCCEEEEECCHHHEEEEEEECCCCCCCCHHCCEEEEECC
TGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGVRMAETGSGVSVWNAPGAQVVGN
CCCEEECCEEEECEEEEEEECCCCCEECCHHHHHHCCCEEEECCCCEEEECCCCHHHHCC
TIRYGRDGIYTNASRKNIFRDNVMEDVRFAVHYMYTDDSAVIGNVSRNNSVGFAIMYTNR
HHHCCCCCEEECCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCCCEEEEEEEECC
LKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMQPIERWLEAGLQKGEHGVPGEEKVE
CHHHHCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEC
ASAGETARLGPEKCVFIYNANKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQV
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEE
KYVGTRNLDWSVDGRGNYWSDNPAFDLDGDGIADSPYRPNDLIDRVLWTVPQAKILINSP
EEEECCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
AVDTIRWAQTQFPALLPGGVVDSHPLMKPLLKPTAQLKESKHND
CCCCEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVLPRLFRTAGIMSLLAAALCAGAQARQIDVAVGESVQAAIEKAEPGDVVRLRAGRHEGA
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCC
VVIDRAIELTGEPGAVLDGLGTGNAITVNAPNAIVRGLEVHGSGDNLPDLHSGIFVSRTA
EEEEEEEEECCCCCCEEECCCCCCEEEEECCHHHEEEEEEECCCCCCCCHHCCEEEEECC
TGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGVRMAETGSGVSVWNAPGAQVVGN
CCCEEECCEEEECEEEEEEECCCCCEECCHHHHHHCCCEEEECCCCEEEECCCCHHHHCC
TIRYGRDGIYTNASRKNIFRDNVMEDVRFAVHYMYTDDSAVIGNVSRNNSVGFAIMYTNR
HHHCCCCCEEECCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCCCCCEEEEEEEECC
LKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMQPIERWLEAGLQKGEHGVPGEEKVE
CHHHHCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEC
ASAGETARLGPEKCVFIYNANKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQV
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEE
KYVGTRNLDWSVDGRGNYWSDNPAFDLDGDGIADSPYRPNDLIDRVLWTVPQAKILINSP
EEEECCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
AVDTIRWAQTQFPALLPGGVVDSHPLMKPLLKPTAQLKESKHND
CCCCEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]