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The map label for this gene is cycA [H]

Identifier: 225686029

GI number: 225686029

Start: 159475

End: 159870

Strand: Direct

Name: cycA [H]

Synonym: BMEA_B0174

Alternate gene names: 225686029

Gene position: 159475-159870 (Clockwise)

Preceding gene: 225686028

Following gene: 225686031

Centisome position: 13.45

GC content: 50.51

Gene sequence:

>396_bases
ATGCGTGCTGCAATGACCGCGATTTCCGCAATCGCAGCTTCCCTTTTGATCTCGACTGTCGCGCAAGGGGCGGATATCGA
ATCCGGCAAGAAGATTTTCAACGCATGCAAGGCTTGCCATCAGATTGGTGAGGGGGCGAAAAATATGGTCGGCCCTGAGC
TCAACGGGCTCTTTGGGCGTCACTCGGGTTCCGTCGAAGGATATAAGTATTCCGACGCAAACAAGAATTCCGGAATTGTC
TGGGATGAGGAAATTTTCCGCAAATACATCAAGAAGCCGCGTGAAGTGATCCCGAAGACCAAGATGGTCTATGCTGGCTT
GAAGGATGAGGGAAAGATCGACGACCTGATTGCATTTCTCAAGCAGTATGATCTGGGCGGCAAGATCAAGGAATAA

Upstream 100 bases:

>100_bases
GTGCGCCCTATAATTCTTATCAGGCTTATGGTTCAGCAGCAGTTCTGGAGTGAGCGATTATGGGCTGGGCCGCCCCAATA
AAACCAAGGAGTTCAGCAAT

Downstream 100 bases:

>100_bases
GAATAACGCCGTCTTGATGTTTTGTTTTCAAGCTGCGCAACCTATTTCGTCGGGTTGCGCAGTGAGAGATATGCCGGATG
CTTCATCCAAAAGTCGCCAT

Product: cytochrome c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRAAMTAISAIAASLLISTVAQGADIESGKKIFNACKACHQIGEGAKNMVGPELNGLFGRHSGSVEGYKYSDANKNSGIV
WDEEIFRKYIKKPREVIPKTKMVYAGLKDEGKIDDLIAFLKQYDLGGKIKE

Sequences:

>Translated_131_residues
MRAAMTAISAIAASLLISTVAQGADIESGKKIFNACKACHQIGEGAKNMVGPELNGLFGRHSGSVEGYKYSDANKNSGIV
WDEEIFRKYIKKPREVIPKTKMVYAGLKDEGKIDDLIAFLKQYDLGGKIKE
>Mature_131_residues
MRAAMTAISAIAASLLISTVAQGADIESGKKIFNACKACHQIGEGAKNMVGPELNGLFGRHSGSVEGYKYSDANKNSGIV
WDEEIFRKYIKKPREVIPKTKMVYAGLKDEGKIDDLIAFLKQYDLGGKIKE

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=100, Percent_Identity=47, Blast_Score=105, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17566554, Length=97, Percent_Identity=48.4536082474227, Blast_Score=96, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17539604, Length=98, Percent_Identity=44.8979591836735, Blast_Score=90, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320796, Length=104, Percent_Identity=46.1538461538462, Blast_Score=105, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322508, Length=87, Percent_Identity=47.1264367816092, Blast_Score=98, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17137228, Length=98, Percent_Identity=47.9591836734694, Blast_Score=104, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17137204, Length=99, Percent_Identity=50.5050505050505, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14269; Mature: 14269

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAMTAISAIAASLLISTVAQGADIESGKKIFNACKACHQIGEGAKNMVGPELNGLFGR
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCC
HSGSVEGYKYSDANKNSGIVWDEEIFRKYIKKPREVIPKTKMVYAGLKDEGKIDDLIAFL
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH
KQYDLGGKIKE
HHHCCCCCCCC
>Mature Secondary Structure
MRAAMTAISAIAASLLISTVAQGADIESGKKIFNACKACHQIGEGAKNMVGPELNGLFGR
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCC
HSGSVEGYKYSDANKNSGIVWDEEIFRKYIKKPREVIPKTKMVYAGLKDEGKIDDLIAFL
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH
KQYDLGGKIKE
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697576; 174109; 7674304 [H]